RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 WFDC8Q8IUA0 241 aa8.12□□□□□ -1.11
COPS3-217ENST00000583160 FMR1NBQ8N0W7 255 aaPredicted RBP8.12□□□□□ -1.11
COPS3-217ENST00000583160 EDEM1Q92611 657 aa8.12□□□□□ -1.11
COPS3-217ENST00000583160 ABI2Q9NYB9 513 aaPredicted RBP8.12□□□□□ -1.11
COPS3-217ENST00000583160 C9orf172C9J069 976 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 ADAM23O75077 832 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 SELPP16109 830 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 EIF1AXP47813 144 aaKnown RBP8.11□□□□□ -1.11
COPS3-217ENST00000583160 DOC2BQ14184 412 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 MTMR7Q9Y216 660 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 USTQ9Y2C2 406 aa8.11□□□□□ -1.11
COPS3-217ENST00000583160 RPLP1P05386 114 aaKnown RBP8.1□□□□□ -1.11
COPS3-217ENST00000583160 PCSK2P16519 638 aa8.1□□□□□ -1.11
COPS3-217ENST00000583160 HYAL2Q12891 473 aa8.1□□□□□ -1.11
COPS3-217ENST00000583160 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
COPS3-217ENST00000583160 PDE12Q6L8Q7 609 aaKnown RBP8.1□□□□□ -1.11
COPS3-217ENST00000583160 SHISA2Q6UWI4 295 aa8.1□□□□□ -1.11
COPS3-217ENST00000583160 DTWD1Q8N5C7 304 aa8.1□□□□□ -1.11
COPS3-217ENST00000583160 ELP3Q9H9T3 547 aa8.1□□□□□ -1.11
COPS3-217ENST00000583160 K7ELQ4 463 aaPredicted RBP8.09□□□□□ -1.11
COPS3-217ENST00000583160 PDGFAP04085 211 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 MZF1P28698 734 aaPredicted RBP8.09□□□□□ -1.11
COPS3-217ENST00000583160 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.11
COPS3-217ENST00000583160 ALKBH2Q6NS38 261 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 ZNF438Q7Z4V0 828 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 FBXO11Q86XK2 927 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
COPS3-217ENST00000583160 SPACA7Q96KW9 195 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 GGNBP2Q9H3C7 697 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 TMEM63CQ9P1W3 806 aa8.09□□□□□ -1.11
COPS3-217ENST00000583160 ABL1P00519 1130 aa8.08□□□□□ -1.12
COPS3-217ENST00000583160 CYP2E1P05181 493 aaPredicted RBP8.08□□□□□ -1.12
COPS3-217ENST00000583160 AAMPQ13685 434 aa8.08□□□□□ -1.12
COPS3-217ENST00000583160 IL22RA1Q8N6P7 574 aa8.08□□□□□ -1.12
COPS3-217ENST00000583160 TTC16Q8NEE8 873 aa8.08□□□□□ -1.12
COPS3-217ENST00000583160 A6NHS1 94 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 FAM13AO94988 1023 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 KIF4AO95239 1232 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 NPR3P17342 541 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 FKBP4Q02790 459 aaKnown RBP eCLIP8.07□□□□□ -1.12
COPS3-217ENST00000583160 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
COPS3-217ENST00000583160 ADGRE1Q14246 886 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 XKR5Q6UX68 686 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 ANO2Q9NQ90 1003 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 CNTN3Q9P232 1028 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 POLIQ9UNA4 740 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
COPS3-217ENST00000583160 ATP11AP98196 1134 aa8.06□□□□□ -1.12
COPS3-217ENST00000583160 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
COPS3-217ENST00000583160 MBTPS1Q14703 1052 aa8.06□□□□□ -1.12
COPS3-217ENST00000583160 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
COPS3-217ENST00000583160 USP21Q9UK80 565 aa8.06□□□□□ -1.12
COPS3-217ENST00000583160 DEAF1O75398 565 aaPredicted RBP8.05□□□□□ -1.12
COPS3-217ENST00000583160 ZNF211Q13398 564 aaPredicted RBP8.05□□□□□ -1.12
COPS3-217ENST00000583160 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 C1orf127Q8N9H9 656 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 TPSG1Q9NRR2 321 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
COPS3-217ENST00000583160 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPS3-217ENST00000583160 IGF2-ASQ6U949 168 aa8.04□□□□□ -1.12
COPS3-217ENST00000583160 TXNRD3Q86VQ6 643 aa8.04□□□□□ -1.12
COPS3-217ENST00000583160 CEP120Q8N960 986 aa8.04□□□□□ -1.12
COPS3-217ENST00000583160 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.04□□□□□ -1.12
COPS3-217ENST00000583160 CES1P23141 567 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 RETREG2Q8NC44 543 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 PBX4Q9BYU1 374 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 LACRTQ9GZZ8 138 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 SEMA6BQ9H3T3 888 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 PPME1Q9Y570 386 aa8.03□□□□□ -1.12
COPS3-217ENST00000583160 DLL1O00548 723 aa8.02□□□□□ -1.13
COPS3-217ENST00000583160 FZD6O60353 706 aa8.02□□□□□ -1.13
COPS3-217ENST00000583160 SETDB1Q15047 1291 aa8.02□□□□□ -1.13
COPS3-217ENST00000583160 RSPO4Q2I0M5 234 aaPredicted RBP8.02□□□□□ -1.13
COPS3-217ENST00000583160 PMEPA1Q969W9 287 aa8.02□□□□□ -1.13
COPS3-217ENST00000583160 MUC3BQ9H195 1237 aa8.02□□□□□ -1.13
COPS3-217ENST00000583160 CCDC87Q9NVE4 849 aa8.02□□□□□ -1.13
COPS3-217ENST00000583160 ICMTO60725 284 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 USP5P45974 858 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 SERPINB4P48594 390 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 NKAPLQ5M9Q1 402 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 ADAMTSL4Q6UY14 1074 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 WFDC12Q8WWY7 111 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 SRA1Q9HD15 236 aaKnown RBP8.01□□□□□ -1.13
COPS3-217ENST00000583160 EGFL7Q9UHF1 273 aa8.01□□□□□ -1.13
COPS3-217ENST00000583160 LINC01387J3KSC0 135 aa8□□□□□ -1.13
COPS3-217ENST00000583160 CDC27P30260 824 aa8□□□□□ -1.13
COPS3-217ENST00000583160 IREB2P48200 963 aaKnown RBP8□□□□□ -1.13
COPS3-217ENST00000583160 EHHADHQ08426 723 aa8□□□□□ -1.13
COPS3-217ENST00000583160 MAP4K3Q8IVH8 894 aa8□□□□□ -1.13
COPS3-217ENST00000583160 POP1Q99575 1024 aaKnown RBP8□□□□□ -1.13
COPS3-217ENST00000583160 CHRDQ9H2X0 955 aa8□□□□□ -1.13
COPS3-217ENST00000583160 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
COPS3-217ENST00000583160 TNFRSF21O75509 655 aa7.99□□□□□ -1.13
COPS3-217ENST00000583160 ACPPP15309 386 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms