RNA–Protein interactions for RNA: ENST00000582914.1

RARA-210, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-210ENST00000582914 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
RARA-210ENST00000582914 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
RARA-210ENST00000582914 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
RARA-210ENST00000582914 POLLQ9UGP5 575 aa15.34■□□□□ 0.05
RARA-210ENST00000582914 G3V3G9 751 aa15.33■□□□□ 0.04
RARA-210ENST00000582914 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
RARA-210ENST00000582914 GPSM2P81274 684 aa15.33■□□□□ 0.04
RARA-210ENST00000582914 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
RARA-210ENST00000582914 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
RARA-210ENST00000582914 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
RARA-210ENST00000582914 IRS4O14654 1257 aaPredicted RBP15.32■□□□□ 0.04
RARA-210ENST00000582914 SLC10A3P09131 477 aa15.32■□□□□ 0.04
RARA-210ENST00000582914 VIL1P09327 827 aaKnown RBP15.32■□□□□ 0.04
RARA-210ENST00000582914 FKBP1BP68106 108 aa15.32■□□□□ 0.04
RARA-210ENST00000582914 KIF23Q02241 960 aaPredicted RBP15.32■□□□□ 0.04
RARA-210ENST00000582914 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
RARA-210ENST00000582914 ZIC5Q96T25 663 aa15.32■□□□□ 0.04
RARA-210ENST00000582914 TNRC18O15417 2968 aaPredicted RBP15.32■□□□□ 0.04
RARA-210ENST00000582914 COL4A1P02462 1669 aa15.32■□□□□ 0.04
RARA-210ENST00000582914 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
RARA-210ENST00000582914 RBM26Q5T8P6 1007 aaKnown RBP15.31■□□□□ 0.04
RARA-210ENST00000582914 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
RARA-210ENST00000582914 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
RARA-210ENST00000582914 GGA3Q9NZ52 723 aa15.31■□□□□ 0.04
RARA-210ENST00000582914 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
RARA-210ENST00000582914 PITPNM2Q9BZ72 1349 aa15.31■□□□□ 0.04
RARA-210ENST00000582914 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 EGFRP00533 1210 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 GOLGA2Q08379 1002 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 DOK7Q18PE1 504 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 RNF186Q9NXI6 227 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
RARA-210ENST00000582914 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
RARA-210ENST00000582914 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
RARA-210ENST00000582914 CCDC152Q4G0S7 254 aa15.29■□□□□ 0.04
RARA-210ENST00000582914 RSBN1LQ6PCB5 846 aaPredicted RBP15.29■□□□□ 0.04
RARA-210ENST00000582914 CDCA5Q96FF9 252 aa15.29■□□□□ 0.04
RARA-210ENST00000582914 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
RARA-210ENST00000582914 TRPA1O75762 1119 aa15.28■□□□□ 0.04
RARA-210ENST00000582914 UFL1O94874 794 aa15.28■□□□□ 0.04
RARA-210ENST00000582914 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
RARA-210ENST00000582914 RIC3Q7Z5B4 369 aa15.28■□□□□ 0.04
RARA-210ENST00000582914 CTU1Q7Z7A3 348 aaKnown RBP15.28■□□□□ 0.04
RARA-210ENST00000582914 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
RARA-210ENST00000582914 ZNF646O15015 1829 aaPredicted RBP15.28■□□□□ 0.04
RARA-210ENST00000582914 XDHP47989 1333 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 PDE8AO60658 829 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 PKN2Q16513 984 aaKnown RBP15.27■□□□□ 0.04
RARA-210ENST00000582914 ANGEL2Q5VTE6 544 aaKnown RBP15.27■□□□□ 0.04
RARA-210ENST00000582914 DUSP27Q5VZP5 1158 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 DLK2Q6UY11 383 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 PODNQ7Z5L7 613 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 CSRNP1Q96S65 589 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 KCNQ5Q9NR82 932 aa15.27■□□□□ 0.04
RARA-210ENST00000582914 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
RARA-210ENST00000582914 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 ATP2B4P23634 1241 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 MMP14P50281 582 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
RARA-210ENST00000582914 SCARF1Q14162 830 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
RARA-210ENST00000582914 RASAL3Q86YV0 1011 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 CCDC146Q8IYE0 955 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 MYOZ2Q9NPC6 264 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
RARA-210ENST00000582914 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
RARA-210ENST00000582914 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 LAMB1P07942 1786 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
RARA-210ENST00000582914 MYO3BQ8WXR4 1341 aa15.24■□□□□ 0.03
RARA-210ENST00000582914 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
RARA-210ENST00000582914 GMLQ99445 158 aa15.24■□□□□ 0.03
RARA-210ENST00000582914 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
RARA-210ENST00000582914 SEC31BQ9NQW1 1179 aa15.24■□□□□ 0.03
RARA-210ENST00000582914 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
RARA-210ENST00000582914 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
RARA-210ENST00000582914 MED23Q9ULK4 1368 aa15.24■□□□□ 0.03
RARA-210ENST00000582914 NF2P35240 595 aa15.23■□□□□ 0.03
RARA-210ENST00000582914 MYD88Q99836 296 aa15.23■□□□□ 0.03
RARA-210ENST00000582914 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
RARA-210ENST00000582914 ASTN2O75129 1339 aaPredicted RBP15.22■□□□□ 0.03
RARA-210ENST00000582914 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
RARA-210ENST00000582914 SOX10P56693 466 aa15.22■□□□□ 0.03
RARA-210ENST00000582914 GNAI1P63096 354 aa15.22■□□□□ 0.03
RARA-210ENST00000582914 OGFOD1Q8N543 542 aa15.22■□□□□ 0.03
RARA-210ENST00000582914 HDAC9Q9UKV0 1011 aa15.22■□□□□ 0.03
RARA-210ENST00000582914 PRPF38BQ5VTL8 546 aaKnown RBP15.21■□□□□ 0.03
RARA-210ENST00000582914 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.03
RARA-210ENST00000582914 PHAXQ9H814 394 aaKnown RBP15.21■□□□□ 0.03
RARA-210ENST00000582914 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
RARA-210ENST00000582914 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms