RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 PUS3Q9BZE2 481 aaKnown RBP20.7■□□□□ 0.9
ERBB2-212ENST00000582788 BOLA2Q9H3K6 86 aa20.7■□□□□ 0.9
ERBB2-212ENST00000582788 NHSQ6T4R5 1651 aa20.7■□□□□ 0.9
ERBB2-212ENST00000582788 BTAF1O14981 1849 aa20.7■□□□□ 0.9
ERBB2-212ENST00000582788 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.7■□□□□ 0.9
ERBB2-212ENST00000582788 SGSM2O43147 1006 aa20.69■□□□□ 0.9
ERBB2-212ENST00000582788 CIAO1O76071 339 aa20.69■□□□□ 0.9
ERBB2-212ENST00000582788 DBNDD2Q9BQY9 259 aa20.69■□□□□ 0.9
ERBB2-212ENST00000582788 RAD50Q92878 1312 aa20.68■□□□□ 0.9
ERBB2-212ENST00000582788 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
ERBB2-212ENST00000582788 ONECUT3O60422 494 aaPredicted RBP20.68■□□□□ 0.9
ERBB2-212ENST00000582788 TERF1P54274 439 aa20.68■□□□□ 0.9
ERBB2-212ENST00000582788 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.68■□□□□ 0.9
ERBB2-212ENST00000582788 TTLL11Q8NHH1 800 aa20.68■□□□□ 0.9
ERBB2-212ENST00000582788 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
ERBB2-212ENST00000582788 ZNF500O60304 480 aaPredicted RBP20.67■□□□□ 0.9
ERBB2-212ENST00000582788 CWC27Q6UX04 472 aaKnown RBP20.67■□□□□ 0.9
ERBB2-212ENST00000582788 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
ERBB2-212ENST00000582788 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
ERBB2-212ENST00000582788 WDR33Q9C0J8 1336 aaKnown RBP20.67■□□□□ 0.9
ERBB2-212ENST00000582788 ATP5JP18859 108 aa20.66■□□□□ 0.9
ERBB2-212ENST00000582788 CTSWP56202 376 aa20.66■□□□□ 0.9
ERBB2-212ENST00000582788 IFIT5Q13325 482 aaKnown RBP20.66■□□□□ 0.9
ERBB2-212ENST00000582788 SUSD4Q5VX71 490 aa20.66■□□□□ 0.9
ERBB2-212ENST00000582788 MYH3P11055 1940 aa20.66■□□□□ 0.9
ERBB2-212ENST00000582788 GREM2Q9H772 168 aa20.66■□□□□ 0.9
ERBB2-212ENST00000582788 RPAP1Q9BWH6 1393 aaPredicted RBP20.66■□□□□ 0.9
ERBB2-212ENST00000582788 TIMM10P62072 90 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 SEPT12Q8IYM1 358 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 DIAPH3Q9NSV4 1193 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 FBXO3Q9UK99 471 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 ZNF609O15014 1411 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 PDE8AO60658 829 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 SYAP1Q96A49 352 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-212ENST00000582788 TTC14Q96N46 770 aa20.65■□□□□ 0.9
ERBB2-212ENST00000582788 LSG1Q9H089 658 aaKnown RBP20.65■□□□□ 0.9
ERBB2-212ENST00000582788 CNTNAP4Q9C0A0 1308 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 BCORQ6W2J9 1755 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 ITGA6P23229 1130 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 TSPY26PQ9H489 355 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 ZKSCAN5Q9Y2L8 839 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 SNX14Q9Y5W7 946 aa20.64■□□□□ 0.89
ERBB2-212ENST00000582788 SBF2Q86WG5 1849 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 SOCS7O14512 581 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 TAF7LQ5H9L4 462 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 TMEM87AQ8NBN3 555 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 EDC3Q96F86 508 aaKnown RBP20.63■□□□□ 0.89
ERBB2-212ENST00000582788 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 MCM5P33992 734 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 CEP126Q9P2H0 1117 aa20.63■□□□□ 0.89
ERBB2-212ENST00000582788 A0A1B0GUL7 405 aa20.62■□□□□ 0.89
ERBB2-212ENST00000582788 GADD45BO75293 160 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-212ENST00000582788 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
ERBB2-212ENST00000582788 RUFY2Q8WXA3 655 aa20.62■□□□□ 0.89
ERBB2-212ENST00000582788 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
ERBB2-212ENST00000582788 CCDC39Q9UFE4 941 aa20.62■□□□□ 0.89
ERBB2-212ENST00000582788 NIP7Q9Y221 180 aaKnown RBP eCLIP20.62■□□□□ 0.894e-6■□□□□ 10.9
ERBB2-212ENST00000582788 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
ERBB2-212ENST00000582788 SH3TC1Q8TE82 1336 aa20.62■□□□□ 0.89
ERBB2-212ENST00000582788 SMIM5Q71RC9 77 aa20.61■□□□□ 0.89
ERBB2-212ENST00000582788 USP48Q86UV5 1035 aa20.61■□□□□ 0.89
ERBB2-212ENST00000582788 FSD1Q9BTV5 496 aa20.61■□□□□ 0.89
ERBB2-212ENST00000582788 ANKRD18BA2A2Z9 1011 aa20.61■□□□□ 0.89
ERBB2-212ENST00000582788 RNF214Q8ND24 703 aa20.61■□□□□ 0.89
ERBB2-212ENST00000582788 FAM227BQ96M60 508 aa20.61■□□□□ 0.89
ERBB2-212ENST00000582788 HIP1O00291 1037 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 PHF14O94880 888 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 NTSR2O95665 410 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 HCLS1P14317 486 aaPredicted RBP20.6■□□□□ 0.89
ERBB2-212ENST00000582788 HAUS7Q99871 368 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 GDPD2Q9HCC8 539 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 CCNL1Q9UK58 526 aaPredicted RBP20.6■□□□□ 0.89
ERBB2-212ENST00000582788 RIPOR2Q9Y4F9 1068 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 LY75O60449 1722 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 NMIQ13287 307 aaPredicted RBP20.6■□□□□ 0.89
ERBB2-212ENST00000582788 RC3H1Q5TC82 1133 aaKnown RBP20.6■□□□□ 0.89
ERBB2-212ENST00000582788 LDHAL6AQ6ZMR3 332 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 RASEFQ8IZ41 740 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 AK7Q96M32 723 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 DNAJC2Q99543 621 aaKnown RBP20.6■□□□□ 0.89
ERBB2-212ENST00000582788 PDCL3Q9H2J4 239 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 ZNF652Q9Y2D9 606 aa20.6■□□□□ 0.89
ERBB2-212ENST00000582788 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
ERBB2-212ENST00000582788 TCHHQ07283 1943 aa20.59■□□□□ 0.89
ERBB2-212ENST00000582788 DDX60Q8IY21 1712 aaKnown RBP20.59■□□□□ 0.89
ERBB2-212ENST00000582788 AK2P54819 239 aa20.58■□□□□ 0.89
ERBB2-212ENST00000582788 RUFY3Q7L099 469 aa20.58■□□□□ 0.89
ERBB2-212ENST00000582788 A0A0D9SFI3 127 aa20.58■□□□□ 0.88
ERBB2-212ENST00000582788 FOXD4L6Q3SYB3 417 aaPredicted RBP20.58■□□□□ 0.88
ERBB2-212ENST00000582788 FOXD4L3Q6VB84 417 aaPredicted RBP20.58■□□□□ 0.88
ERBB2-212ENST00000582788 LIMCH1Q9UPQ0 1083 aa20.58■□□□□ 0.88
ERBB2-212ENST00000582788 AKAP2Q9Y2D5 859 aa20.58■□□□□ 0.88
ERBB2-212ENST00000582788 RPS6KA4O75676 772 aa20.57■□□□□ 0.88
ERBB2-212ENST00000582788 ZSCAN22P10073 491 aaPredicted RBP20.57■□□□□ 0.88
ERBB2-212ENST00000582788 PTH1RQ03431 593 aa20.57■□□□□ 0.88
ERBB2-212ENST00000582788 SCN7AQ01118 1682 aa20.57■□□□□ 0.88
ERBB2-212ENST00000582788 SNRKQ9NRH2 765 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 TAF1LQ8IZX4 1826 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms