RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 NEFMP07197 916 aa11.58□□□□□ -0.56
CDK5RAP3-224ENST00000582275 TM4SF4P48230 202 aa11.58□□□□□ -0.56
CDK5RAP3-224ENST00000582275 FXR1P51114 621 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDK5RAP3-224ENST00000582275 CFHR5Q9BXR6 569 aa11.58□□□□□ -0.56
CDK5RAP3-224ENST00000582275 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
CDK5RAP3-224ENST00000582275 PITPNM2Q9BZ72 1349 aa11.58□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ANKRD36CQ5JPF3 1778 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ECE2O60344 883 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ALDH1A1P00352 501 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 EGFRP00533 1210 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 U2AF1L5P0DN76 240 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 U2AF1Q01081 240 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
CDK5RAP3-224ENST00000582275 G3V3G9 751 aa11.56□□□□□ -0.56
CDK5RAP3-224ENST00000582275 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
CDK5RAP3-224ENST00000582275 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-224ENST00000582275 NF2P35240 595 aa11.56□□□□□ -0.56
CDK5RAP3-224ENST00000582275 EIF4A1P60842 406 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-224ENST00000582275 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ZNF609O15014 1411 aa11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 HCLS1P14317 486 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ZNF280AP59817 542 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 TCIRG1Q13488 830 aa11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ANGEL2Q5VTE6 544 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 AGBL3Q8NEM8 1001 aa11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 MIS18AQ9NYP9 233 aa11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 TRMT112Q9UI30 125 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 KIAA0100Q14667 2235 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-224ENST00000582275 DUOX1Q9NRD9 1551 aa11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 SCARF1Q14162 830 aa11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 NLRP10Q86W26 655 aa11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 LRRC37AA6NMS7 1700 aa11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 RTL9Q8NET4 1388 aa11.54□□□□□ -0.56
CDK5RAP3-224ENST00000582275 INHBEP58166 350 aa11.53□□□□□ -0.56
CDK5RAP3-224ENST00000582275 POLLQ9UGP5 575 aa11.53□□□□□ -0.56
CDK5RAP3-224ENST00000582275 TRIM17Q9Y577 477 aa11.53□□□□□ -0.56
CDK5RAP3-224ENST00000582275 LAMB2P55268 1798 aa11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 KDM3BQ7LBC6 1761 aa11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 UBE2Q2LH0YL09 131 aa11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 RSBN1LQ6PCB5 846 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ARMC9Q7Z3E5 817 aa11.52□□□□□ -0.57
CDK5RAP3-224ENST00000582275 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 MMP14P50281 582 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 GPSM2P81274 684 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 TBC1D16Q8TBP0 767 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ERO1AQ96HE7 468 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 MYOZ2Q9NPC6 264 aa11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ASTN2O75129 1339 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-224ENST00000582275 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 MANSC4A6NHS7 340 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 LRP10Q7Z4F1 713 aa11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 KCNQ5Q9NR82 932 aa11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 RPS8P62241 208 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ARHGEF6Q15052 776 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PDIA6Q15084 440 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 OTUD7BQ6GQQ9 843 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 POTEHQ6S545 545 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 GGA1Q9UJY5 639 aa11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-224ENST00000582275 DLL1O00548 723 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 UFL1O94874 794 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 COPS6Q7L5N1 327 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 GMLQ99445 158 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 BABAM1Q9NWV8 329 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ANKIB1Q9P2G1 1089 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PTPN22Q9Y2R2 807 aa11.48□□□□□ -0.57
CDK5RAP3-224ENST00000582275 TRIOBPQ9H2D6 2365 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 SCN9AQ15858 1988 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 TAF1P21675 1872 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 AIMP1Q12904 312 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms