RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
TOP3A-212ENST00000582122 HTRA3P83110 453 aa13.05□□□□□ -0.32
TOP3A-212ENST00000582122 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
TOP3A-212ENST00000582122 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
TOP3A-212ENST00000582122 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
TOP3A-212ENST00000582122 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-212ENST00000582122 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-212ENST00000582122 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
TOP3A-212ENST00000582122 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
TOP3A-212ENST00000582122 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
TOP3A-212ENST00000582122 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
TOP3A-212ENST00000582122 KIAA2012Q0VF49 1180 aa13.04□□□□□ -0.32
TOP3A-212ENST00000582122 NIM1KQ8IY84 436 aa13.04□□□□□ -0.32
TOP3A-212ENST00000582122 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
TOP3A-212ENST00000582122 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
TOP3A-212ENST00000582122 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
TOP3A-212ENST00000582122 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
TOP3A-212ENST00000582122 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 LDHAL6AQ6ZMR3 332 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
TOP3A-212ENST00000582122 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
TOP3A-212ENST00000582122 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 MINPP1Q9UNW1 487 aa13.03□□□□□ -0.32
TOP3A-212ENST00000582122 GNAI2P04899 355 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 PRELPP51888 382 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 GPSM2P81274 684 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 PDE3AQ14432 1141 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 KAZALD1Q96I82 304 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 CNNM1Q9NRU3 951 aa13.02□□□□□ -0.33
TOP3A-212ENST00000582122 G3V3G9 751 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 FZD9O00144 591 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 CAPN15O75808 1086 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 UFL1O94874 794 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 KCNJ4P48050 445 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 MEIS3Q99687 375 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 ZNRF3Q9ULT6 936 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
TOP3A-212ENST00000582122 IQCA1LA6NCM1 817 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 MTX1Q13505 466 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 TNIP1Q15025 636 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 AOC3Q16853 763 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 ANKRD44Q8N8A2 993 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 POLLQ9UGP5 575 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 LRRFIP2Q9Y608 721 aaKnown RBP13□□□□□ -0.33
TOP3A-212ENST00000582122 PCNTO95613 3336 aa13□□□□□ -0.33
TOP3A-212ENST00000582122 TAF1P21675 1872 aa12.99□□□□□ -0.33
TOP3A-212ENST00000582122 MED23Q9ULK4 1368 aa12.99□□□□□ -0.33
TOP3A-212ENST00000582122 HSPA1AP0DMV8 641 aaKnown RBP12.99□□□□□ -0.33
TOP3A-212ENST00000582122 HSPA1BP0DMV9 641 aaKnown RBP12.99□□□□□ -0.33
TOP3A-212ENST00000582122 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-212ENST00000582122 CHRNDQ07001 517 aa12.99□□□□□ -0.33
TOP3A-212ENST00000582122 GPC2Q8N158 579 aa12.99□□□□□ -0.33
TOP3A-212ENST00000582122 ZNF804BA4D1E1 1349 aa12.98□□□□□ -0.33
TOP3A-212ENST00000582122 CIAO1O76071 339 aa12.98□□□□□ -0.33
TOP3A-212ENST00000582122 C15orf52Q6ZUT6 534 aaKnown RBP12.98□□□□□ -0.33
TOP3A-212ENST00000582122 PODNQ7Z5L7 613 aa12.98□□□□□ -0.33
TOP3A-212ENST00000582122 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-212ENST00000582122 TIAM2Q8IVF5 1701 aa12.97□□□□□ -0.33
TOP3A-212ENST00000582122 ZBTB7BO15156 539 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-212ENST00000582122 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
TOP3A-212ENST00000582122 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
TOP3A-212ENST00000582122 COA1Q9GZY4 146 aa12.97□□□□□ -0.33
TOP3A-212ENST00000582122 RIPOR2Q9Y4F9 1068 aa12.97□□□□□ -0.33
TOP3A-212ENST00000582122 EYA2O00167 538 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 SRGAP3O43295 1099 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 RLBP1P12271 317 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-212ENST00000582122 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-212ENST00000582122 MMP14P50281 582 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 CIAPIN1Q6FI81 312 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.33
TOP3A-212ENST00000582122 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
TOP3A-212ENST00000582122 LTBP1Q14766 1721 aa12.96□□□□□ -0.34
TOP3A-212ENST00000582122 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
TOP3A-212ENST00000582122 ECE2O60344 883 aa12.95□□□□□ -0.34
TOP3A-212ENST00000582122 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
TOP3A-212ENST00000582122 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-212ENST00000582122 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
TOP3A-212ENST00000582122 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
TOP3A-212ENST00000582122 PANK1Q8TE04 598 aa12.95□□□□□ -0.34
TOP3A-212ENST00000582122 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
TOP3A-212ENST00000582122 DDNO94850 711 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-212ENST00000582122 PDE8BO95263 885 aa12.94□□□□□ -0.34
TOP3A-212ENST00000582122 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
TOP3A-212ENST00000582122 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-212ENST00000582122 DPF2Q92785 391 aa12.94□□□□□ -0.34
TOP3A-212ENST00000582122 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms