RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 PRDM10Q9NQV6 1147 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ANKIB1Q9P2G1 1089 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 MAP3K2Q9Y2U5 619 aa15□□□□□ -0.01
CDK5RAP3-223ENST00000582114 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 UFL1O94874 794 aa14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 PCCAP05165 728 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ECE1P42892 770 aa14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 MAP2K1Q02750 393 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CCDC152Q4G0S7 254 aa14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
CDK5RAP3-223ENST00000582114 G3V3G9 751 aa14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 PDE8AO60658 829 aa14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 SAPCD2Q86UD0 394 aa14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ZC3H12CQ9C0D7 883 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 PGAP2Q9UHJ9 254 aa14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 TSKSQ9UJT2 592 aa14.98□□□□□ -0.01
CDK5RAP3-223ENST00000582114 THSD7BQ9C0I4 1608 aa14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 PI4KAP2A4QPH2 592 aa14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 PI4KAP1Q8N8J0 262 aa14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ZC3H15Q8WU90 426 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 BEGAINQ9BUH8 593 aa14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 GGA1Q9UJY5 639 aa14.97□□□□□ -0.01
CDK5RAP3-223ENST00000582114 SCN9AQ15858 1988 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 IGKV5-2P06315 115 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 CWF19L2Q2TBE0 894 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 KSR2Q6VAB6 950 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 G2E3Q7L622 706 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ANKRD18AQ8IVF6 992 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 DPF2Q92785 391 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-223ENST00000582114 ADM5C9JUS6 153 aa14.95□□□□□ -0.02
CDK5RAP3-223ENST00000582114 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-223ENST00000582114 KRT26Q7Z3Y9 468 aa14.95□□□□□ -0.02
CDK5RAP3-223ENST00000582114 WWC1Q8IX03 1113 aa14.95□□□□□ -0.02
CDK5RAP3-223ENST00000582114 PODXL2Q9NZ53 605 aa14.95□□□□□ -0.02
CDK5RAP3-223ENST00000582114 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
CDK5RAP3-223ENST00000582114 WTIPA6NIX2 430 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-223ENST00000582114 RPS12P25398 132 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-223ENST00000582114 CTSWP56202 376 aa14.94□□□□□ -0.02
CDK5RAP3-223ENST00000582114 KIF4BQ2VIQ3 1234 aa14.94□□□□□ -0.02
CDK5RAP3-223ENST00000582114 ASTN2O75129 1339 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 POLR2AP24928 1970 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 VIL1P09327 827 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 GREM2Q9H772 168 aa14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
CDK5RAP3-223ENST00000582114 XDHP47989 1333 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 NEURL1BA8MQ27 555 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 MAP2K2P36507 400 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 HUNKP57058 714 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 TTLL11Q8NHH1 800 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 CDC5LQ99459 802 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 GGA3Q9NZ52 723 aa14.92□□□□□ -0.02
CDK5RAP3-223ENST00000582114 ATP2B4P23634 1241 aa14.91□□□□□ -0.02
CDK5RAP3-223ENST00000582114 RSBN1LQ6PCB5 846 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-223ENST00000582114 FBXW7Q969H0 707 aa14.91□□□□□ -0.02
CDK5RAP3-223ENST00000582114 ZIC5Q96T25 663 aa14.91□□□□□ -0.02
CDK5RAP3-223ENST00000582114 MINPP1Q9UNW1 487 aa14.91□□□□□ -0.02
CDK5RAP3-223ENST00000582114 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
CDK5RAP3-223ENST00000582114 MYH3P11055 1940 aa14.9□□□□□ -0.02
CDK5RAP3-223ENST00000582114 ABHD8Q96I13 439 aa14.9□□□□□ -0.02
CDK5RAP3-223ENST00000582114 HHIPL1Q96JK4 782 aa14.9□□□□□ -0.02
CDK5RAP3-223ENST00000582114 GBA2Q9HCG7 927 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-223ENST00000582114 SCAF8Q9UPN6 1271 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-223ENST00000582114 FLIIQ13045 1269 aa14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 SCARF1Q14162 830 aa14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 ANGEL2Q5VTE6 544 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 MXD3Q9BW11 206 aa14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 BSDC1Q9NW68 430 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-223ENST00000582114 USP17L3A6NCW0 530 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 USP17L4A6NCW7 530 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 H7C1W4 665 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 ANP32CO43423 234 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 BRPF1P55201 1214 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 GCKRQ14397 625 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 USP17L1Q7RTZ2 530 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 C2orf69Q8N8R5 385 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 IL16Q14005 1332 aa14.88□□□□□ -0.03
CDK5RAP3-223ENST00000582114 PSME4Q14997 1843 aa14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 USP17L8P0C7I0 530 aa14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 ITGA6P23229 1130 aa14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 ZNF280AP59817 542 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 NOGQ13253 232 aa14.87□□□□□ -0.03
CDK5RAP3-223ENST00000582114 RGMBQ6NW40 437 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 368.6 ms