RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 UTYO14607 1347 aa16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 SLC34A2O95436 690 aa16.9■□□□□ 0.3
CSNK1D-220ENST00000581737 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-220ENST00000581737 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
CSNK1D-220ENST00000581737 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
CSNK1D-220ENST00000581737 CASP7P55210 303 aa16.89■□□□□ 0.29
CSNK1D-220ENST00000581737 CTSWP56202 376 aa16.89■□□□□ 0.29
CSNK1D-220ENST00000581737 SF3B3Q15393 1217 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-220ENST00000581737 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
CSNK1D-220ENST00000581737 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-220ENST00000581737 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
CSNK1D-220ENST00000581737 GNAI3P08754 354 aa16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 ALDH1B1P30837 517 aa16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 DDX46Q7L014 1031 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 RTKN2Q8IZC4 609 aa16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 TMEM57Q8N5G2 664 aa16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
CSNK1D-220ENST00000581737 UBTFL1P0CB47 393 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 C3orf67Q6ZVT6 689 aa16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 PNMA8AQ86V59 439 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 GPC2Q8N158 579 aa16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 USP44Q9H0E7 712 aa16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 RTL9Q8NET4 1388 aa16.87■□□□□ 0.29
CSNK1D-220ENST00000581737 SCNN1DP51172 638 aa16.86■□□□□ 0.29
CSNK1D-220ENST00000581737 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-220ENST00000581737 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
CSNK1D-220ENST00000581737 TRAF5O00463 557 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 PLIN1O60240 522 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 RLBP1P12271 317 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 EPS15P42566 896 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 CST9Q5W186 159 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 EXOC6Q8TAG9 804 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 TSKSQ9UJT2 592 aa16.85■□□□□ 0.29
CSNK1D-220ENST00000581737 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
CSNK1D-220ENST00000581737 TMC4Q7Z404 712 aa16.84■□□□□ 0.29
CSNK1D-220ENST00000581737 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
CSNK1D-220ENST00000581737 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
CSNK1D-220ENST00000581737 CAPNS2Q96L46 248 aa16.84■□□□□ 0.29
CSNK1D-220ENST00000581737 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-220ENST00000581737 CSF1RP07333 972 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 GRM1Q13255 1194 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 GRAPQ13588 217 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 B4GALNT3Q6L9W6 998 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 GRAPLQ8TC17 118 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 PSMD1Q99460 953 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 MEIS3Q99687 375 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 DDX19BQ9UMR2 479 aa16.83■□□□□ 0.28
CSNK1D-220ENST00000581737 CCDC85CA6NKD9 419 aa16.82■□□□□ 0.28
CSNK1D-220ENST00000581737 AOC2O75106 756 aa16.82■□□□□ 0.28
CSNK1D-220ENST00000581737 BBOX1O75936 387 aa16.82■□□□□ 0.28
CSNK1D-220ENST00000581737 FOXO4P98177 505 aa16.82■□□□□ 0.28
CSNK1D-220ENST00000581737 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 GNAI2P04899 355 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 CC2D2BQ6DHV5 1058 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 PAXIP1Q6ZW49 1069 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 JDP2Q8WYK2 163 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 GPR101Q96P66 508 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 GREM2Q9H772 168 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
CSNK1D-220ENST00000581737 TAF1P21675 1872 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 IFIT5Q13325 482 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 GRIPAP1Q4V328 841 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 ANKRD18AQ8IVF6 992 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 LRRFIP2Q9Y608 721 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-220ENST00000581737 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
CSNK1D-220ENST00000581737 ITGA6P23229 1130 aa16.79■□□□□ 0.28
CSNK1D-220ENST00000581737 RPS8P62241 208 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-220ENST00000581737 SPEF2Q9C093 1822 aa16.79■□□□□ 0.28
CSNK1D-220ENST00000581737 ZBTB7BO15156 539 aaPredicted RBP16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 RGS19P49795 217 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 LARGE2Q8N3Y3 721 aa16.78■□□□□ 0.28
CSNK1D-220ENST00000581737 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms