RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	BOLA2	Q9H3K6	86 aa		11.96	□□□□□ -0.49
TRIM16-222	ENST00000581224	CWC22	Q9HCG8	908 aa	Known RBP	11.96	□□□□□ -0.49
TRIM16-222	ENST00000581224	ZNF609	O15014	1411 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224		A0A1B0GUL7	405 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	UQCRFS1P1	P0C7P4	283 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	PTMS	P20962	102 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	GTF2E1	P29083	439 aa	Predicted RBP	11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	IGHMBP2	P38935	993 aa	Known RBP	11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	TTF1	Q15361	905 aa	Predicted RBP	11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	SUSD4	Q5VX71	490 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	KBTBD3	Q8NAB2	608 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	LINC00116	Q8NCU8	138 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	SETDB2	Q96T68	719 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	RIPOR2	Q9Y4F9	1068 aa		11.95	□□□□□ -0.5
TRIM16-222	ENST00000581224	SCN7A	Q01118	1682 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	UBN2	Q6ZU65	1347 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	PDE8B	O95263	885 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	MAP4K4	O95819	1239 aa	Predicted RBP	11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	IFIT1	P09914	478 aa	Known RBP	11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	PSMA5	P28066	241 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	KCNJ4	P48050	445 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	SLC4A3	P48751	1232 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	KRT32	Q14532	448 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	SLC15A2	Q16348	729 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	ATP2B3	Q16720	1220 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	ZNF827	Q17R98	1081 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	SLC10A5	Q5PT55	438 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	TTC39A	Q5SRH9	613 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	TPTE2	Q6XPS3	522 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	DBNDD2	Q9BQY9	259 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	TM6SF1	Q9BZW5	370 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	HELLS	Q9NRZ9	838 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	TFCP2L1	Q9NZI6	479 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	HMG20B	Q9P0W2	317 aa		11.94	□□□□□ -0.5
TRIM16-222	ENST00000581224	NTSR2	O95665	410 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	PDIA4	P13667	645 aa	Known RBP	11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	SSFA2	P28290	1259 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	RFC4	P35249	363 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	SF3B3	Q15393	1217 aa	Known RBP	11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	PUM3	Q15397	648 aa	Known RBP	11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	LRRC24	Q50LG9	513 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	TRAPPC3L	Q5T215	181 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	LPIN2	Q92539	896 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	GREM2	Q9H772	168 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	PAG1	Q9NWQ8	432 aa		11.93	□□□□□ -0.5
TRIM16-222	ENST00000581224	CCDC171	Q6TFL3	1326 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	C4B	P0C0L5	1744 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	DDX60	Q8IY21	1712 aa	Known RBP	11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	GNPAT	O15228	680 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	SLC5A1	P13866	664 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	NEK4	P51957	841 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	TIMM10	P62072	90 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	MCMDC2	Q4G0Z9	681 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	MAP4K1	Q92918	833 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	CHMP4C	Q96CF2	233 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	ZNF594	Q96JF6	807 aa	Predicted RBP	11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	LSG1	Q9H089	658 aa	Known RBP	11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	TLR7	Q9NYK1	1049 aa	Known RBP	11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224		U3KPZ7	1027 aa	Predicted RBP	11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	CASZ1	Q86V15	1759 aa		11.92	□□□□□ -0.5
TRIM16-222	ENST00000581224	IGSF3	O75054	1194 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	ZBTB7A	O95365	584 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	NUCB2	P80303	420 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	NMI	Q13287	307 aa	Predicted RBP	11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	KCNB2	Q92953	911 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	XAGE2	Q96GT9	111 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	INTS4	Q96HW7	963 aa	Known RBP	11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	NLRP3	Q96P20	1036 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	DNAJC2	Q99543	621 aa	Known RBP	11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	ANTXR1	Q9H6X2	564 aa		11.91	□□□□□ -0.5
TRIM16-222	ENST00000581224	LRP5	O75197	1615 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	PHF14	O94880	888 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	ANKRD1	Q15327	319 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	QSER1	Q2KHR3	1735 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	TSGA10IP	Q3SY00	556 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	TMED8	Q6PL24	325 aa	Predicted RBP	11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	ANKRD18A	Q8IVF6	992 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	ARAP2	Q8WZ64	1704 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	AKT1S1	Q96B36	256 aa		11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	PUS3	Q9BZE2	481 aa	Known RBP	11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	SLK	Q9H2G2	1235 aa	Predicted RBP	11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	GNL3L	Q9NVN8	582 aa	Known RBP	11.9	□□□□□ -0.5
TRIM16-222	ENST00000581224	COL24A1	Q17RW2	1714 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	GOLIM4	O00461	696 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	RNF113A	O15541	343 aa	Known RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	HMGB1	P09429	215 aa	Known RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	HCLS1	P14317	486 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	NECTIN1	Q15223	517 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	FLAD1	Q8NFF5	587 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	CTNNA3	Q9UI47	895 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	CYP46A1	Q9Y6A2	500 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	MYH7	P12883	1935 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	MED23	Q9ULK4	1368 aa		11.89	□□□□□ -0.51
TRIM16-222	ENST00000581224	RIC1	Q4ADV7	1423 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms