RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 TXLNAP40222 546 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 FIGNL1Q6PIW4 674 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 ARXQ96QS3 562 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 MSH6P52701 1360 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 AHDC1Q5TGY3 1603 aaPredicted RBP10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 LGR5O75473 907 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 THBS1P07996 1170 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 NLRP8Q86W28 1048 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 NEUROD4Q9HD90 331 aa10.16□□□□□ -0.78
PPP4R1-216ENST00000580283 EML1O00423 815 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 GAS6Q14393 721 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 SH3PXD2AQ5TCZ1 1133 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 ZIC5Q96T25 663 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 CFHR5Q9BXR6 569 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 NSFL1CQ9UNZ2 370 aaKnown RBP10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 HCN4Q9Y3Q4 1203 aa10.15□□□□□ -0.78
PPP4R1-216ENST00000580283 MX2P20592 715 aa10.14□□□□□ -0.79
PPP4R1-216ENST00000580283 ELOAQ14241 798 aaKnown RBP10.14□□□□□ -0.79
PPP4R1-216ENST00000580283 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
PPP4R1-216ENST00000580283 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
PPP4R1-216ENST00000580283 RGS12O14924 1447 aa10.14□□□□□ -0.79
PPP4R1-216ENST00000580283 DUOX2Q9NRD8 1548 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 AFF2P51816 1311 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 C21orf2O43822 256 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 ATG7O95352 703 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 IGFBP4P22692 258 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 STAG2Q8N3U4 1231 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 ZCCHC2Q9C0B9 1178 aaKnown RBP10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 C1orf115Q9H7X2 142 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 ATXN7L1Q9ULK2 861 aaPredicted RBP10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 PCDHGC4Q9Y5F7 938 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 SETBP1Q9Y6X0 1596 aa10.13□□□□□ -0.79
PPP4R1-216ENST00000580283 ATXN7O15265 892 aaPredicted RBP10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 ADAMTS2O95450 1211 aa10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 HIRAP54198 1017 aaPredicted RBP10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 C1orf53Q5VUE5 145 aa10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 C2orf49Q9BVC5 232 aaPredicted RBP10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 PHACTR1Q9C0D0 580 aa10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 GPC6Q9Y625 555 aaPredicted RBP10.12□□□□□ -0.79
PPP4R1-216ENST00000580283 ZFYVE9O95405 1425 aa10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 NOS1P29475 1434 aa10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 UBAP2LQ14157 1087 aaKnown RBP10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 VTI1AQ96AJ9 217 aa10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 ABHD17AQ96GS6 310 aa10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 QTRT2Q9H974 415 aaKnown RBP10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 ZMIZ1Q9ULJ6 1067 aa10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
PPP4R1-216ENST00000580283 ACIN1Q9UKV3 1341 aaKnown RBP10.1□□□□□ -0.79
PPP4R1-216ENST00000580283 BNIP3LO60238 219 aa10.1□□□□□ -0.79
PPP4R1-216ENST00000580283 SWI5Q1ZZU3 235 aa10.1□□□□□ -0.79
PPP4R1-216ENST00000580283 BRINP3Q76B58 766 aa10.1□□□□□ -0.79
PPP4R1-216ENST00000580283 NGLY1Q96IV0 654 aa10.1□□□□□ -0.79
PPP4R1-216ENST00000580283 ADGRB3O60242 1522 aa10.1□□□□□ -0.79
PPP4R1-216ENST00000580283 NCOA3Q9Y6Q9 1424 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 LMTK2Q8IWU2 1503 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 NHSL1Q5SYE7 1610 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 SLURP2P0DP57 97 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 FGFR3P22607 806 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 LRRC69Q6ZNQ3 347 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 STK32AQ8WU08 396 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 CROCC2H7BZ55 1655 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
PPP4R1-216ENST00000580283 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 KHNYNO15037 678 aaKnown RBP10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 MAP2K3P46734 347 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 RBM6P78332 1123 aaKnown RBP10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 C19orf44Q9H6X5 657 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 NDFIP2Q9NV92 336 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 TBX22Q9Y458 520 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 PLEKHG1Q9ULL1 1385 aa10.08□□□□□ -0.8
PPP4R1-216ENST00000580283 TMEM131LA2VDJ0 1609 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 KIF15Q9NS87 1388 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 FOXO3O43524 673 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 BMP4P12644 408 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 WEE1P30291 646 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 HIF1AQ16665 826 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 ADAMTS13Q76LX8 1427 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 ERBINQ96RT1 1412 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 SETD5Q9C0A6 1442 aa10.07□□□□□ -0.8
PPP4R1-216ENST00000580283 PPP1R15AO75807 674 aaPredicted RBP10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 FAM157BP0CG42 384 aa10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
PPP4R1-216ENST00000580283 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms