RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 LRRFIP2Q9Y608 721 aaKnown RBP11.17□□□□□ -0.62
SENP3-203ENST00000580231 ADCY9O60503 1353 aa11.16□□□□□ -0.62
SENP3-203ENST00000580231 ABCA3Q99758 1704 aa11.16□□□□□ -0.62
SENP3-203ENST00000580231 MTX1Q13505 466 aa11.16□□□□□ -0.62
SENP3-203ENST00000580231 RDH13Q8NBN7 331 aa11.16□□□□□ -0.62
SENP3-203ENST00000580231 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
SENP3-203ENST00000580231 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
SENP3-203ENST00000580231 UTYO14607 1347 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
SENP3-203ENST00000580231 SLC39A6Q13433 755 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 PLA2G2CQ5R387 149 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 ZNF772Q68DY9 489 aaPredicted RBP11.15□□□□□ -0.62
SENP3-203ENST00000580231 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
SENP3-203ENST00000580231 PHOX2BQ99453 314 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 SPSB2Q99619 263 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 C9orf78Q9NZ63 289 aaPredicted RBP11.15□□□□□ -0.62
SENP3-203ENST00000580231 USP35Q9P2H5 1018 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 STAP2Q9UGK3 403 aa11.15□□□□□ -0.62
SENP3-203ENST00000580231 AFF2P51816 1311 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 AOX1Q06278 1338 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 COL22A1Q8NFW1 1626 aaPredicted RBP11.14□□□□□ -0.63
SENP3-203ENST00000580231 PNMA6EA0A0J9YXQ4 647 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PDE1AP54750 535 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PRR20EP86478 221 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PRR20CP86479 221 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PRR20DP86480 221 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PRR20BP86481 221 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PRR20AP86496 221 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 MORN1Q5T089 497 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 ZNF697Q5TEC3 545 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
SENP3-203ENST00000580231 C16orf71Q8IYS4 520 aaPredicted RBP11.14□□□□□ -0.63
SENP3-203ENST00000580231 ANXA1P04083 346 aa11.13□□□□□ -0.63
SENP3-203ENST00000580231 GSPT1P15170 499 aaKnown RBP11.13□□□□□ -0.63
SENP3-203ENST00000580231 PROSER3Q2NL68 480 aa11.13□□□□□ -0.63
SENP3-203ENST00000580231 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
SENP3-203ENST00000580231 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
SENP3-203ENST00000580231 KIF1BPQ96EK5 621 aa11.13□□□□□ -0.63
SENP3-203ENST00000580231 SALL3Q9BXA9 1300 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 PRAMEF22A3QJZ6 481 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 GRM8O00222 908 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 SMARCA5O60264 1052 aaPredicted RBP11.12□□□□□ -0.63
SENP3-203ENST00000580231 NBPF7P0C2Y1 421 aaPredicted RBP11.12□□□□□ -0.63
SENP3-203ENST00000580231 FUT2Q10981 343 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 SNX21Q969T3 373 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 C8orf37Q96NL8 207 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 METTL22Q9BUU2 404 aaPredicted RBP11.12□□□□□ -0.63
SENP3-203ENST00000580231 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
SENP3-203ENST00000580231 STRN4Q9NRL3 753 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 EXOC6BQ9Y2D4 811 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
SENP3-203ENST00000580231 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
SENP3-203ENST00000580231 GDF9O60383 454 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
SENP3-203ENST00000580231 SDSP20132 328 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 ATP6V1AP38606 617 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 GCGRP47871 477 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 COPS6Q7L5N1 327 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 LRP10Q7Z4F1 713 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 THAP11Q96EK4 314 aa11.11□□□□□ -0.63
SENP3-203ENST00000580231 APBB1O00213 710 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 MX1P20591 662 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 AIMP1Q12904 312 aaKnown RBP11.1□□□□□ -0.63
SENP3-203ENST00000580231 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 RHPN1Q8TCX5 695 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SENP3-203ENST00000580231 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
SENP3-203ENST00000580231 BTG4Q9NY30 223 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 COL15A1P39059 1388 aa11.1□□□□□ -0.63
SENP3-203ENST00000580231 C5P01031 1676 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 NEURL1BA8MQ27 555 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 EPB41L2O43491 1005 aaKnown RBP11.09□□□□□ -0.63
SENP3-203ENST00000580231 DGAT1O75907 488 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 REC8O95072 547 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 MYL6BP14649 208 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 RXRBP28702 533 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 PLBD2Q8NHP8 589 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
SENP3-203ENST00000580231 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
SENP3-203ENST00000580231 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 GCKRQ14397 625 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
SENP3-203ENST00000580231 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 SLC27A5Q9Y2P5 690 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
SENP3-203ENST00000580231 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms