RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 DOK7Q18PE1 504 aa23.11■■□□□ 1.29
MKS1-209ENST00000580127 RBM26Q5T8P6 1007 aaKnown RBP23.11■■□□□ 1.29
MKS1-209ENST00000580127 SAMD7Q7Z3H4 446 aa23.11■■□□□ 1.29
MKS1-209ENST00000580127 HUNKP57058 714 aa23.1■■□□□ 1.29
MKS1-209ENST00000580127 TBC1D10BQ4KMP7 808 aaPredicted RBP23.1■■□□□ 1.29
MKS1-209ENST00000580127 PODXL2Q9NZ53 605 aa23.1■■□□□ 1.29
MKS1-209ENST00000580127 DDX60Q8IY21 1712 aaKnown RBP23.1■■□□□ 1.29
MKS1-209ENST00000580127 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
MKS1-209ENST00000580127 PDE8AO60658 829 aa23.09■■□□□ 1.29
MKS1-209ENST00000580127 ZNF853P0CG23 659 aa23.09■■□□□ 1.29
MKS1-209ENST00000580127 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
MKS1-209ENST00000580127 CCDC102AQ96A19 550 aa23.09■■□□□ 1.29
MKS1-209ENST00000580127 MYD88Q99836 296 aa23.09■■□□□ 1.29
MKS1-209ENST00000580127 CWC25Q9NXE8 425 aaPredicted RBP23.09■■□□□ 1.29
MKS1-209ENST00000580127 GGA1Q9UJY5 639 aa23.09■■□□□ 1.29
MKS1-209ENST00000580127 LRRC37AA6NMS7 1700 aa23.08■■□□□ 1.29
MKS1-209ENST00000580127 CCDC85CA6NKD9 419 aa23.08■■□□□ 1.29
MKS1-209ENST00000580127 APAF1O14727 1248 aa23.08■■□□□ 1.29
MKS1-209ENST00000580127 PCCAP05165 728 aaPredicted RBP23.08■■□□□ 1.29
MKS1-209ENST00000580127 SULF1Q8IWU6 871 aa23.08■■□□□ 1.29
MKS1-209ENST00000580127 THSD7BQ9C0I4 1608 aa23.08■■□□□ 1.28
MKS1-209ENST00000580127 SHTN1A0MZ66 631 aa23.07■■□□□ 1.28
MKS1-209ENST00000580127 UFL1O94874 794 aa23.07■■□□□ 1.28
MKS1-209ENST00000580127 VIL1P09327 827 aaKnown RBP23.07■■□□□ 1.28
MKS1-209ENST00000580127 PHAXQ9H814 394 aaKnown RBP23.07■■□□□ 1.28
MKS1-209ENST00000580127 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
MKS1-209ENST00000580127 GBA2Q9HCG7 927 aaPredicted RBP23.07■■□□□ 1.28
MKS1-209ENST00000580127 POLR2AP24928 1970 aaKnown RBP23.07■■□□□ 1.28
MKS1-209ENST00000580127 RGMBQ6NW40 437 aa23.06■■□□□ 1.28
MKS1-209ENST00000580127 ANKRD18AQ8IVF6 992 aa23.06■■□□□ 1.28
MKS1-209ENST00000580127 TSKSQ9UJT2 592 aa23.06■■□□□ 1.28
MKS1-209ENST00000580127 KIF4BQ2VIQ3 1234 aa23.05■■□□□ 1.28
MKS1-209ENST00000580127 AGBL3Q8NEM8 1001 aa23.05■■□□□ 1.28
MKS1-209ENST00000580127 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
MKS1-209ENST00000580127 KCNQ5Q9NR82 932 aa23.05■■□□□ 1.28
MKS1-209ENST00000580127 DUOX1Q9NRD9 1551 aa23.05■■□□□ 1.28
MKS1-209ENST00000580127 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
MKS1-209ENST00000580127 CDC5LQ99459 802 aaKnown RBP23.04■■□□□ 1.28
MKS1-209ENST00000580127 SEC31BQ9NQW1 1179 aa23.04■■□□□ 1.28
MKS1-209ENST00000580127 ZNF157P51786 506 aaPredicted RBP23.03■■□□□ 1.28
MKS1-209ENST00000580127 XDHP47989 1333 aa23.03■■□□□ 1.28
MKS1-209ENST00000580127 ATP2B4P23634 1241 aa23.02■■□□□ 1.28
MKS1-209ENST00000580127 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
MKS1-209ENST00000580127 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
MKS1-209ENST00000580127 RSBN1LQ6PCB5 846 aaPredicted RBP23.01■■□□□ 1.27
MKS1-209ENST00000580127 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
MKS1-209ENST00000580127 PODNQ7Z5L7 613 aa23.01■■□□□ 1.27
MKS1-209ENST00000580127 REM2Q8IYK8 340 aaPredicted RBP23.01■■□□□ 1.27
MKS1-209ENST00000580127 C8orf58Q8NAV2 365 aa23.01■■□□□ 1.27
MKS1-209ENST00000580127 CASP8AP2Q9UKL3 1982 aa23■■□□□ 1.27
MKS1-209ENST00000580127 MLLT1Q03111 559 aaPredicted RBP23■■□□□ 1.27
MKS1-209ENST00000580127 MAP3K2Q9Y2U5 619 aa23■■□□□ 1.27
MKS1-209ENST00000580127 USP17L3A6NCW0 530 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 USP17L4A6NCW7 530 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 EGFRP00533 1210 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 USP17L8P0C7I0 530 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 USP17L1Q7RTZ2 530 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 CCDC85AQ96PX6 553 aaPredicted RBP22.99■■□□□ 1.27
MKS1-209ENST00000580127 SAGE1Q9NXZ1 904 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 GGA3Q9NZ52 723 aa22.99■■□□□ 1.27
MKS1-209ENST00000580127 ADM5C9JUS6 153 aa22.98■■□□□ 1.27
MKS1-209ENST00000580127 ZNF280AP59817 542 aaPredicted RBP22.98■■□□□ 1.27
MKS1-209ENST00000580127 DGKZQ13574 1117 aa22.98■■□□□ 1.27
MKS1-209ENST00000580127 SCARF1Q14162 830 aa22.98■■□□□ 1.27
MKS1-209ENST00000580127 MCOLN1Q9GZU1 580 aa22.98■■□□□ 1.27
MKS1-209ENST00000580127 FKBP1BP68106 108 aa22.97■■□□□ 1.27
MKS1-209ENST00000580127 OGFOD1Q8N543 542 aa22.97■■□□□ 1.27
MKS1-209ENST00000580127 JARID2Q92833 1246 aaPredicted RBP22.97■■□□□ 1.27
MKS1-209ENST00000580127 PI4KAP2A4QPH2 592 aa22.96■■□□□ 1.27
MKS1-209ENST00000580127 MMP14P50281 582 aa22.96■■□□□ 1.27
MKS1-209ENST00000580127 CTSWP56202 376 aa22.96■■□□□ 1.27
MKS1-209ENST00000580127 KIF23Q02241 960 aaPredicted RBP22.96■■□□□ 1.27
MKS1-209ENST00000580127 FAM161AQ3B820 660 aa22.96■■□□□ 1.27
MKS1-209ENST00000580127 DLK2Q6UY11 383 aa22.96■■□□□ 1.27
MKS1-209ENST00000580127 PI4KAP1Q8N8J0 262 aa22.96■■□□□ 1.27
MKS1-209ENST00000580127 BSDC1Q9NW68 430 aaPredicted RBP22.96■■□□□ 1.27
MKS1-209ENST00000580127 RGS19P49795 217 aa22.95■■□□□ 1.26
MKS1-209ENST00000580127 ANGEL2Q5VTE6 544 aaKnown RBP22.95■■□□□ 1.26
MKS1-209ENST00000580127 CDCA5Q96FF9 252 aa22.95■■□□□ 1.26
MKS1-209ENST00000580127 MYOZ2Q9NPC6 264 aa22.95■■□□□ 1.26
MKS1-209ENST00000580127 FAM155AB1AL88 458 aaPredicted RBP22.94■■□□□ 1.26
MKS1-209ENST00000580127 TTLL11Q8NHH1 800 aa22.94■■□□□ 1.26
MKS1-209ENST00000580127 PITPNM2Q9BZ72 1349 aa22.93■■□□□ 1.26
MKS1-209ENST00000580127 IGHMBP2P38935 993 aaKnown RBP22.93■■□□□ 1.26
MKS1-209ENST00000580127 ZIC5Q96T25 663 aa22.93■■□□□ 1.26
MKS1-209ENST00000580127 SCN9AQ15858 1988 aa22.92■■□□□ 1.26
MKS1-209ENST00000580127 AKAP11Q9UKA4 1901 aa22.92■■□□□ 1.26
MKS1-209ENST00000580127 ZNF609O15014 1411 aa22.92■■□□□ 1.26
MKS1-209ENST00000580127 TRPA1O75762 1119 aa22.92■■□□□ 1.26
MKS1-209ENST00000580127 GMLQ99445 158 aa22.92■■□□□ 1.26
MKS1-209ENST00000580127 MINPP1Q9UNW1 487 aa22.92■■□□□ 1.26
MKS1-209ENST00000580127 MYO3BQ8WXR4 1341 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 SLC4A2P04920 1241 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 SLC10A3P09131 477 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 NF2P35240 595 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 TSPYL6Q8N831 410 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 ANKRD2Q9GZV1 360 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 COA1Q9GZY4 146 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 RNF186Q9NXI6 227 aa22.91■■□□□ 1.26
MKS1-209ENST00000580127 LEMD3Q9Y2U8 911 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms