RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 RIMBP2O15034 1052 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SOX10P56693 466 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 PKN2Q16513 984 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 KIF4BQ2VIQ3 1234 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 POLLQ9UGP5 575 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 G3V3G9 751 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 EGFRP00533 1210 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 VIL1P09327 827 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DLK2Q6UY11 383 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CELF1Q92879 486 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 GGA3Q9NZ52 723 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 GPSM2P81274 684 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ANKRD13DQ6ZTN6 518 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 AGBL3Q8NEM8 1001 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 TBC1D16Q8TBP0 767 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RTL9Q8NET4 1388 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HOXB7P09629 217 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DOK7Q18PE1 504 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CDCA5Q96FF9 252 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ZNF609O15014 1411 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-216ENST00000579853 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PITPNM2Q9BZ72 1349 aa15.92■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DBF4Q9UBU7 674 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HDAC9Q9UKV0 1011 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CHL1O00533 1208 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 SCARF1Q14162 830 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ANGEL2Q5VTE6 544 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RSBN1LQ6PCB5 846 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 GGA1Q9UJY5 639 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HPS5Q9UPZ3 1129 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 MKI67P46013 3256 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 UFL1O94874 794 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 HTTP42858 3142 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 CENPFP49454 3210 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ATP5J2-PTCD1G3V325 749 aa15.88■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L8P0C7I0 530 aa15.88■□□□□ 0.13
CDK5RAP3-216ENST00000579853 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
CDK5RAP3-216ENST00000579853 PODNQ7Z5L7 613 aa15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ZBTB38Q8NAP3 1195 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ZNF296Q8WUU4 475 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GCC1Q96CN9 775 aa15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ASTN2O75129 1339 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 NF2P35240 595 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 MMP14P50281 582 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 CCDC152Q4G0S7 254 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ZNF428Q96B54 188 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 PSME4Q14997 1843 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 XDHP47989 1333 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 CEP290O15078 2479 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 TM4SF4P48230 202 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 SREBF2Q12772 1141 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 FBXO46Q6PJ61 603 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GMLQ99445 158 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 KRT24Q2M2I5 525 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 OGFOD1Q8N543 542 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 SEC31BQ9NQW1 1179 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GPR25O00155 361 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 PDE8AO60658 829 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 ATP2B4P23634 1241 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 RALBP1Q15311 655 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CFHR5Q9BXR6 569 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 KIAA0100Q14667 2235 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 PCCAP05165 728 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 ANKRD18AQ8IVF6 992 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms