RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 TBC1D16Q8TBP0 767 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
MKS1-208ENST00000579358 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 POLLQ9UGP5 575 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 GGA1Q9UJY5 639 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 MYH3P11055 1940 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 UFL1O94874 794 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 RLBP1P12271 317 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
MKS1-208ENST00000579358 ANKRD2Q9GZV1 360 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 SBF1O95248 1867 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
MKS1-208ENST00000579358 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 CHRNDQ07001 517 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 WASHC4Q2M389 1173 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 LDHAL6AQ6ZMR3 332 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 ITPRIPQ8IWB1 547 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
MKS1-208ENST00000579358 COL4A5P29400 1685 aa12.56□□□□□ -0.4
MKS1-208ENST00000579358 GNAI2P04899 355 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
MKS1-208ENST00000579358 MTX1Q13505 466 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 ZNF526Q8TF50 670 aaPredicted RBP12.55□□□□□ -0.4
MKS1-208ENST00000579358 ZNF594Q96JF6 807 aaPredicted RBP12.55□□□□□ -0.4
MKS1-208ENST00000579358 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 ZNF541Q9H0D2 1346 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 TAF1P21675 1872 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 MED23Q9ULK4 1368 aa12.55□□□□□ -0.4
MKS1-208ENST00000579358 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
MKS1-208ENST00000579358 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
MKS1-208ENST00000579358 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
MKS1-208ENST00000579358 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
MKS1-208ENST00000579358 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
MKS1-208ENST00000579358 ZBTB7BO15156 539 aaPredicted RBP12.53□□□□□ -0.4
MKS1-208ENST00000579358 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
MKS1-208ENST00000579358 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
MKS1-208ENST00000579358 GPC2Q8N158 579 aa12.53□□□□□ -0.4
MKS1-208ENST00000579358 PANK1Q8TE04 598 aa12.53□□□□□ -0.4
MKS1-208ENST00000579358 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
MKS1-208ENST00000579358 ZNF804BA4D1E1 1349 aa12.53□□□□□ -0.4
MKS1-208ENST00000579358 MROH5Q6ZUA9 1318 aa12.53□□□□□ -0.4
MKS1-208ENST00000579358 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.4
MKS1-208ENST00000579358 KIF3CO14782 793 aa12.52□□□□□ -0.41
MKS1-208ENST00000579358 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
MKS1-208ENST00000579358 PLIN1O60240 522 aa12.52□□□□□ -0.41
MKS1-208ENST00000579358 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
MKS1-208ENST00000579358 KCNJ4P48050 445 aa12.52□□□□□ -0.41
MKS1-208ENST00000579358 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
MKS1-208ENST00000579358 GPR101Q96P66 508 aaPredicted RBP12.52□□□□□ -0.41
MKS1-208ENST00000579358 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
MKS1-208ENST00000579358 CHMP4BQ9H444 224 aaKnown RBP12.52□□□□□ -0.41
MKS1-208ENST00000579358 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
MKS1-208ENST00000579358 DDX19BQ9UMR2 479 aa12.52□□□□□ -0.41
MKS1-208ENST00000579358 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 YDJCA8MPS7 323 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 EYA2O00167 538 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 ECE2O60344 883 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 CIAO1O76071 339 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 VEGFAP15692 232 aaPredicted RBP12.51□□□□□ -0.41
MKS1-208ENST00000579358 CXCL9Q07325 125 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 TNIP1Q15025 636 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 LRRC24Q50LG9 513 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 KLHDC4Q8TBB5 520 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 COPRSQ9NQ92 184 aa12.51□□□□□ -0.41
MKS1-208ENST00000579358 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 G3V3G9 751 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 TAF5LO75529 589 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 UBE4AQ14139 1066 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 METTL24Q5JXM2 366 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 PODNQ7Z5L7 613 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
MKS1-208ENST00000579358 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 COG6Q9Y2V7 657 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
MKS1-208ENST00000579358 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
MKS1-208ENST00000579358 POTECB2RU33 542 aa12.49□□□□□ -0.41
MKS1-208ENST00000579358 PDE8BO95263 885 aa12.49□□□□□ -0.41
MKS1-208ENST00000579358 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
MKS1-208ENST00000579358 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
MKS1-208ENST00000579358 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
MKS1-208ENST00000579358 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 ZNF609O15014 1411 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 SNAP23O00161 211 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 RAD17O75943 681 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 KLRK1P26718 216 aa12.48□□□□□ -0.41
MKS1-208ENST00000579358 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
MKS1-208ENST00000579358 SCNN1DP51172 638 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms