RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 SPEF2Q9C093 1822 aa30.18■■■□□ 2.42
LIMD2-207ENST00000579329 ANKRD18BA2A2Z9 1011 aa30.18■■■□□ 2.42
LIMD2-207ENST00000579329 NBPF7P0C2Y1 421 aaPredicted RBP30.18■■■□□ 2.42
LIMD2-207ENST00000579329 CCT4P50991 539 aaKnown RBP30.18■■■□□ 2.42
LIMD2-207ENST00000579329 TBC1D16Q8TBP0 767 aa30.18■■■□□ 2.42
LIMD2-207ENST00000579329 POLLQ9UGP5 575 aa30.18■■■□□ 2.42
LIMD2-207ENST00000579329 CHMP3Q9Y3E7 222 aa30.18■■■□□ 2.42
LIMD2-207ENST00000579329 WASHC4Q2M389 1173 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 EPHA10Q5JZY3 1008 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 LMBR1LQ6UX01 489 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 ARHGAP45Q92619 1136 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 SUCLG2Q96I99 432 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 L3MBTL3Q96JM7 780 aaPredicted RBP30.17■■■□□ 2.42
LIMD2-207ENST00000579329 GGA1Q9UJY5 639 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 XDHP47989 1333 aa30.17■■■□□ 2.42
LIMD2-207ENST00000579329 POTECB2RU33 542 aa30.16■■■□□ 2.42
LIMD2-207ENST00000579329 UFL1O94874 794 aa30.16■■■□□ 2.42
LIMD2-207ENST00000579329 IFIT5Q13325 482 aaKnown RBP30.16■■■□□ 2.42
LIMD2-207ENST00000579329 GPC2Q8N158 579 aa30.16■■■□□ 2.42
LIMD2-207ENST00000579329 ZNRF3Q9ULT6 936 aa30.16■■■□□ 2.42
LIMD2-207ENST00000579329 CAPN15O75808 1086 aa30.15■■■□□ 2.42
LIMD2-207ENST00000579329 MPHOSPH8Q99549 860 aa30.15■■■□□ 2.42
LIMD2-207ENST00000579329 IPO8O15397 1037 aaKnown RBP30.14■■■□□ 2.42
LIMD2-207ENST00000579329 MINPP1Q9UNW1 487 aa30.14■■■□□ 2.42
LIMD2-207ENST00000579329 IQCA1LA6NCM1 817 aa30.13■■■□□ 2.41
LIMD2-207ENST00000579329 BCAR3O75815 825 aa30.13■■■□□ 2.41
LIMD2-207ENST00000579329 ATP2B4P23634 1241 aa30.13■■■□□ 2.41
LIMD2-207ENST00000579329 KAZALD1Q96I82 304 aa30.13■■■□□ 2.41
LIMD2-207ENST00000579329 USP44Q9H0E7 712 aa30.13■■■□□ 2.41
LIMD2-207ENST00000579329 RIMBP2O15034 1052 aa30.12■■■□□ 2.41
LIMD2-207ENST00000579329 CCDC57Q2TAC2 916 aa30.12■■■□□ 2.41
LIMD2-207ENST00000579329 TNS4Q8IZW8 715 aa30.12■■■□□ 2.41
LIMD2-207ENST00000579329 GJA3Q9Y6H8 435 aa30.12■■■□□ 2.41
LIMD2-207ENST00000579329 SCN4AP35499 1836 aa30.11■■■□□ 2.41
LIMD2-207ENST00000579329 GPR101Q96P66 508 aaPredicted RBP30.11■■■□□ 2.41
LIMD2-207ENST00000579329 ZC3H12CQ9C0D7 883 aaKnown RBP30.11■■■□□ 2.41
LIMD2-207ENST00000579329 CXCL9Q07325 125 aa30.09■■■□□ 2.41
LIMD2-207ENST00000579329 TAF7LQ5H9L4 462 aa30.09■■■□□ 2.41
LIMD2-207ENST00000579329 FRAT1Q92837 279 aaPredicted RBP30.09■■■□□ 2.41
LIMD2-207ENST00000579329 ANKRD2Q9GZV1 360 aa30.09■■■□□ 2.41
LIMD2-207ENST00000579329 BICC1Q9H694 974 aaKnown RBP30.09■■■□□ 2.41
LIMD2-207ENST00000579329 HACL1Q9UJ83 578 aa30.09■■■□□ 2.41
LIMD2-207ENST00000579329 RABL6Q3YEC7 729 aaPredicted RBP30.08■■■□□ 2.41
LIMD2-207ENST00000579329 CIAPIN1Q6FI81 312 aa30.08■■■□□ 2.41
LIMD2-207ENST00000579329 DBNDD1Q9H9R9 158 aa30.08■■■□□ 2.41
LIMD2-207ENST00000579329 ATF7IPQ6VMQ6 1270 aa30.07■■■□□ 2.4
LIMD2-207ENST00000579329 YDJCA8MPS7 323 aa30.06■■■□□ 2.4
LIMD2-207ENST00000579329 ECE2O60344 883 aa30.06■■■□□ 2.4
LIMD2-207ENST00000579329 HSPA1AP0DMV8 641 aaKnown RBP30.06■■■□□ 2.4
LIMD2-207ENST00000579329 HSPA1BP0DMV9 641 aaKnown RBP30.06■■■□□ 2.4
LIMD2-207ENST00000579329 TRIM27P14373 513 aa30.06■■■□□ 2.4
LIMD2-207ENST00000579329 TNIP1Q15025 636 aa30.06■■■□□ 2.4
LIMD2-207ENST00000579329 INTS3Q68E01 1043 aaKnown RBP30.06■■■□□ 2.4
LIMD2-207ENST00000579329 ANKRD44Q8N8A2 993 aa30.06■■■□□ 2.4
LIMD2-207ENST00000579329 TAF1DQ9H5J8 278 aaPredicted RBP30.06■■■□□ 2.4
LIMD2-207ENST00000579329 LEMD3Q9Y2U8 911 aa30.06■■■□□ 2.4
LIMD2-207ENST00000579329 G3V3G9 751 aa30.05■■■□□ 2.4
LIMD2-207ENST00000579329 UBTFL1P0CB47 393 aaPredicted RBP30.05■■■□□ 2.4
LIMD2-207ENST00000579329 LMOD1P29536 600 aaPredicted RBP30.05■■■□□ 2.4
LIMD2-207ENST00000579329 CHRNDQ07001 517 aa30.05■■■□□ 2.4
LIMD2-207ENST00000579329 DOK7Q18PE1 504 aa30.05■■■□□ 2.4
LIMD2-207ENST00000579329 DCAF8Q5TAQ9 597 aa30.05■■■□□ 2.4
LIMD2-207ENST00000579329 MED23Q9ULK4 1368 aa30.04■■■□□ 2.4
LIMD2-207ENST00000579329 RAD17O75943 681 aa30.04■■■□□ 2.4
LIMD2-207ENST00000579329 ZKSCAN2Q63HK3 967 aa30.04■■■□□ 2.4
LIMD2-207ENST00000579329 ZNF594Q96JF6 807 aaPredicted RBP30.04■■■□□ 2.4
LIMD2-207ENST00000579329 EPHX2P34913 555 aa30.03■■■□□ 2.4
LIMD2-207ENST00000579329 LDHAL6AQ6ZMR3 332 aa30.03■■■□□ 2.4
LIMD2-207ENST00000579329 CNNM1Q9NRU3 951 aa30.03■■■□□ 2.4
LIMD2-207ENST00000579329 HDAC5Q9UQL6 1122 aa30.03■■■□□ 2.4
LIMD2-207ENST00000579329 SCNN1DP51172 638 aa30.02■■■□□ 2.4
LIMD2-207ENST00000579329 ZNF804BA4D1E1 1349 aa30.01■■■□□ 2.4
LIMD2-207ENST00000579329 KCNJ4P48050 445 aa30■■■□□ 2.39
LIMD2-207ENST00000579329 TNNQ9UQP3 1299 aa30■■■□□ 2.39
LIMD2-207ENST00000579329 WTIPA6NIX2 430 aaPredicted RBP29.99■■■□□ 2.39
LIMD2-207ENST00000579329 GMPSP49915 693 aaPredicted RBP29.99■■■□□ 2.39
LIMD2-207ENST00000579329 PNMA8AQ86V59 439 aaPredicted RBP29.99■■■□□ 2.39
LIMD2-207ENST00000579329 CLUAP1Q96AJ1 413 aa29.99■■■□□ 2.39
LIMD2-207ENST00000579329 MEIS3Q99687 375 aa29.99■■■□□ 2.39
LIMD2-207ENST00000579329 A0A1B0GUL6 1792 aa29.99■■■□□ 2.39
LIMD2-207ENST00000579329 PSMD14O00487 310 aa29.98■■■□□ 2.39
LIMD2-207ENST00000579329 EAPPQ56P03 285 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-207ENST00000579329 GPRC5DQ9NZD1 345 aa29.98■■■□□ 2.39
LIMD2-207ENST00000579329 GNAI3P08754 354 aa29.97■■■□□ 2.39
LIMD2-207ENST00000579329 EPS15P42566 896 aa29.97■■■□□ 2.39
LIMD2-207ENST00000579329 LDHDQ86WU2 507 aa29.97■■■□□ 2.39
LIMD2-207ENST00000579329 HELBQ8NG08 1087 aaPredicted RBP29.97■■■□□ 2.39
LIMD2-207ENST00000579329 TAF5LO75529 589 aa29.96■■■□□ 2.39
LIMD2-207ENST00000579329 POTEIP0CG38 1075 aa29.96■■■□□ 2.39
LIMD2-207ENST00000579329 POTEJP0CG39 1038 aa29.96■■■□□ 2.39
LIMD2-207ENST00000579329 CHADLQ6NUI6 762 aa29.96■■■□□ 2.39
LIMD2-207ENST00000579329 PODNQ7Z5L7 613 aa29.96■■■□□ 2.39
LIMD2-207ENST00000579329 PUS3Q9BZE2 481 aaKnown RBP29.95■■■□□ 2.39
LIMD2-207ENST00000579329 KCNQ5Q9NR82 932 aa29.95■■■□□ 2.39
LIMD2-207ENST00000579329 LRRFIP2Q9Y608 721 aaKnown RBP29.95■■■□□ 2.39
LIMD2-207ENST00000579329 SCN9AQ15858 1988 aa29.94■■■□□ 2.38
LIMD2-207ENST00000579329 COA1Q9GZY4 146 aa29.94■■■□□ 2.38
LIMD2-207ENST00000579329 ADAMTSL1Q8N6G6 1762 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 PLIN1O60240 522 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 RPS12P25398 132 aaKnown RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms