RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 C2orf69Q8N8R5 385 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 CCDC102AQ96A19 550 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 ZIC5Q96T25 663 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 KCNQ5Q9NR82 932 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 PODXL2Q9NZ53 605 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
CASC3-206ENST00000579238 FAM155AB1AL88 458 aaPredicted RBP11.11□□□□□ -0.63
CASC3-206ENST00000579238 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
CASC3-206ENST00000579238 VIL1P09327 827 aaKnown RBP11.11□□□□□ -0.63
CASC3-206ENST00000579238 DGKZQ13574 1117 aa11.11□□□□□ -0.63
CASC3-206ENST00000579238 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
CASC3-206ENST00000579238 KIF4BQ2VIQ3 1234 aa11.11□□□□□ -0.63
CASC3-206ENST00000579238 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
CASC3-206ENST00000579238 ZBTB38Q8NAP3 1195 aaPredicted RBP11.11□□□□□ -0.63
CASC3-206ENST00000579238 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
CASC3-206ENST00000579238 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
CASC3-206ENST00000579238 ZNF157P51786 506 aaPredicted RBP11.1□□□□□ -0.63
CASC3-206ENST00000579238 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
CASC3-206ENST00000579238 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
CASC3-206ENST00000579238 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
CASC3-206ENST00000579238 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
CASC3-206ENST00000579238 COL4A1P02462 1669 aa11.1□□□□□ -0.63
CASC3-206ENST00000579238 G3V3G9 751 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 UFL1O94874 794 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 KIF23Q02241 960 aaPredicted RBP11.09□□□□□ -0.63
CASC3-206ENST00000579238 CCDC152Q4G0S7 254 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 SEC31BQ9NQW1 1179 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 GGA3Q9NZ52 723 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 ZNF609O15014 1411 aa11.09□□□□□ -0.63
CASC3-206ENST00000579238 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
CASC3-206ENST00000579238 PDE8AO60658 829 aa11.08□□□□□ -0.64
CASC3-206ENST00000579238 PCCAP05165 728 aaPredicted RBP11.08□□□□□ -0.64
CASC3-206ENST00000579238 SLC10A3P09131 477 aa11.08□□□□□ -0.64
CASC3-206ENST00000579238 ZNF853P0CG23 659 aa11.08□□□□□ -0.64
CASC3-206ENST00000579238 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
CASC3-206ENST00000579238 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
CASC3-206ENST00000579238 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
CASC3-206ENST00000579238 AGBL3Q8NEM8 1001 aa11.08□□□□□ -0.64
CASC3-206ENST00000579238 ASTN2O75129 1339 aaPredicted RBP11.08□□□□□ -0.64
CASC3-206ENST00000579238 SCN9AQ15858 1988 aa11.07□□□□□ -0.64
CASC3-206ENST00000579238 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
CASC3-206ENST00000579238 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
CASC3-206ENST00000579238 CDCA5Q96FF9 252 aa11.07□□□□□ -0.64
CASC3-206ENST00000579238 MYD88Q99836 296 aa11.07□□□□□ -0.64
CASC3-206ENST00000579238 PHAXQ9H814 394 aaKnown RBP11.07□□□□□ -0.64
CASC3-206ENST00000579238 IFT57Q9NWB7 429 aa11.07□□□□□ -0.64
CASC3-206ENST00000579238 CWC25Q9NXE8 425 aaPredicted RBP11.07□□□□□ -0.64
CASC3-206ENST00000579238 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
CASC3-206ENST00000579238 XDHP47989 1333 aa11.07□□□□□ -0.64
CASC3-206ENST00000579238 TRPA1O75762 1119 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 GNAI1P63096 354 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 FKBP1BP68106 108 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
CASC3-206ENST00000579238 SCARF1Q14162 830 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 ANGEL2Q5VTE6 544 aaKnown RBP11.06□□□□□ -0.64
CASC3-206ENST00000579238 ANKRD18AQ8IVF6 992 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 CSRNP1Q96S65 589 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 GMLQ99445 158 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 PITPNM2Q9BZ72 1349 aa11.06□□□□□ -0.64
CASC3-206ENST00000579238 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
CASC3-206ENST00000579238 DDX58O95786 925 aaKnown RBP11.05□□□□□ -0.64
CASC3-206ENST00000579238 USP17L8P0C7I0 530 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 RASAL3Q86YV0 1011 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 METTL22Q9BUU2 404 aaPredicted RBP11.05□□□□□ -0.64
CASC3-206ENST00000579238 CHMP4AQ9BY43 222 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
CASC3-206ENST00000579238 APAF1O14727 1248 aa11.04□□□□□ -0.64
CASC3-206ENST00000579238 CCDC30Q5VVM6 783 aa11.04□□□□□ -0.64
CASC3-206ENST00000579238 JARID2Q92833 1246 aaPredicted RBP11.04□□□□□ -0.64
CASC3-206ENST00000579238 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
CASC3-206ENST00000579238 CDC5LQ99459 802 aaKnown RBP11.04□□□□□ -0.64
CASC3-206ENST00000579238 CTSWP56202 376 aa11.03□□□□□ -0.64
CASC3-206ENST00000579238 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
CASC3-206ENST00000579238 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
CASC3-206ENST00000579238 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
CASC3-206ENST00000579238 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
CASC3-206ENST00000579238 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
CASC3-206ENST00000579238 PSME4Q14997 1843 aa11.02□□□□□ -0.64
CASC3-206ENST00000579238 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
CASC3-206ENST00000579238 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.65
CASC3-206ENST00000579238 MAP3K2Q9Y2U5 619 aa11.02□□□□□ -0.65
CASC3-206ENST00000579238 IGKV5-2P06315 115 aa11.01□□□□□ -0.65
CASC3-206ENST00000579238 SOX10P56693 466 aa11.01□□□□□ -0.65
CASC3-206ENST00000579238 KSR2Q6VAB6 950 aa11.01□□□□□ -0.65
CASC3-206ENST00000579238 OGFOD1Q8N543 542 aa11.01□□□□□ -0.65
CASC3-206ENST00000579238 TTLL11Q8NHH1 800 aa11.01□□□□□ -0.65
CASC3-206ENST00000579238 GREM2Q9H772 168 aa11.01□□□□□ -0.65
CASC3-206ENST00000579238 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
CASC3-206ENST00000579238 MYO3BQ8WXR4 1341 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms