RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SSH3Q8TE77 659 aa19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 PUS3Q9BZE2 481 aaKnown RBP19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 COPRSQ9NQ92 184 aa19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 RIPOR2Q9Y4F9 1068 aa19.36■□□□□ 0.69
SLC6A4-205ENST00000579221 LTBP3Q9NS15 1303 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 EYA2O00167 538 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 NFKBIEO00221 500 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 ATP2B4P23634 1241 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 CHRNDQ07001 517 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 POLA2Q14181 598 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 ARFGEF1Q9Y6D6 1849 aa19.35■□□□□ 0.69
SLC6A4-205ENST00000579221 XDHP47989 1333 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 MROH5Q6ZUA9 1318 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 C6orf229H3BNL8 230 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 HMMRO75330 724 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 CIAO1O76071 339 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 LRRC24Q50LG9 513 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 SLC51AQ86UW1 340 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 RTFDC1Q9BY42 306 aaPredicted RBP19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 VPS33BQ9H267 617 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 GGA1Q9UJY5 639 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 TAF1P21675 1872 aa19.34■□□□□ 0.69
SLC6A4-205ENST00000579221 COL4A1P02462 1669 aa19.33■□□□□ 0.69
SLC6A4-205ENST00000579221 RASSF7Q02833 373 aa19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 EXOC6Q8TAG9 804 aa19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 EYA3Q99504 573 aa19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 SIL1Q9H173 461 aa19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 PA2G4Q9UQ80 394 aaKnown RBP19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 LEMD3Q9Y2U8 911 aa19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 CACNA1SQ13698 1873 aa19.33■□□□□ 0.68
SLC6A4-205ENST00000579221 LMNB1P20700 586 aa19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 IL15P40933 162 aaPredicted RBP19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 METTL24Q5JXM2 366 aa19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 TBC1D16Q8TBP0 767 aa19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 POLLQ9UGP5 575 aa19.32■□□□□ 0.68
SLC6A4-205ENST00000579221 UFL1O94874 794 aa19.31■□□□□ 0.68
SLC6A4-205ENST00000579221 KCNJ4P48050 445 aa19.31■□□□□ 0.68
SLC6A4-205ENST00000579221 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
SLC6A4-205ENST00000579221 ZNF277Q9NRM2 450 aaPredicted RBP19.31■□□□□ 0.68
SLC6A4-205ENST00000579221 SNED1Q8TER0 1413 aa19.31■□□□□ 0.68
SLC6A4-205ENST00000579221 TAF5LO75529 589 aa19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 WASHC4Q2M389 1173 aa19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 ATG9AQ7Z3C6 839 aa19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 ZC3H12CQ9C0D7 883 aaKnown RBP19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 CEP126Q9P2H0 1117 aa19.3■□□□□ 0.68
SLC6A4-205ENST00000579221 ZNF804BA4D1E1 1349 aa19.29■□□□□ 0.68
SLC6A4-205ENST00000579221 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
SLC6A4-205ENST00000579221 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
SLC6A4-205ENST00000579221 RNF181Q9P0P0 153 aa19.29■□□□□ 0.68
SLC6A4-205ENST00000579221 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
SLC6A4-205ENST00000579221 PPIP5K2O43314 1243 aa19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 PDE8BO95263 885 aa19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 OS9Q13438 667 aaPredicted RBP19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 UBE4AQ14139 1066 aa19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 HSP90AB4PQ58FF6 505 aa19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 PCDHB15Q9Y5E8 787 aa19.28■□□□□ 0.68
SLC6A4-205ENST00000579221 G3V3G9 751 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 RIMBP2O15034 1052 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 PRELPP51888 382 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 AOC3Q16853 763 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 JDP2Q8WYK2 163 aa19.27■□□□□ 0.68
SLC6A4-205ENST00000579221 LRRC37AA6NMS7 1700 aa19.26■□□□□ 0.67
SLC6A4-205ENST00000579221 VGLL2Q8N8G2 317 aa19.26■□□□□ 0.67
SLC6A4-205ENST00000579221 FER1L6Q2WGJ9 1857 aa19.26■□□□□ 0.67
SLC6A4-205ENST00000579221 WTIPA6NIX2 430 aaPredicted RBP19.25■□□□□ 0.67
SLC6A4-205ENST00000579221 ERC1Q8IUD2 1116 aa19.25■□□□□ 0.67
SLC6A4-205ENST00000579221 GPR101Q96P66 508 aaPredicted RBP19.25■□□□□ 0.67
SLC6A4-205ENST00000579221 AKAP2Q9Y2D5 859 aa19.25■□□□□ 0.67
SLC6A4-205ENST00000579221 SNAP23O00161 211 aa19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 NEFLP07196 543 aa19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 IFIT1P09914 478 aaKnown RBP19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 TFCP2Q12800 502 aa19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 PUM3Q15397 648 aaKnown RBP19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 C15orf52Q6ZUT6 534 aaKnown RBP19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 NIM1KQ8IY84 436 aa19.24■□□□□ 0.67
SLC6A4-205ENST00000579221 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
SLC6A4-205ENST00000579221 RAB11FIP3O75154 756 aa19.23■□□□□ 0.67
SLC6A4-205ENST00000579221 SASH1O94885 1247 aa19.23■□□□□ 0.67
SLC6A4-205ENST00000579221 LPIN2Q92539 896 aa19.23■□□□□ 0.67
SLC6A4-205ENST00000579221 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
SLC6A4-205ENST00000579221 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
SLC6A4-205ENST00000579221 SLC5A1P13866 664 aa19.22■□□□□ 0.67
SLC6A4-205ENST00000579221 FGFR2P21802 821 aa19.22■□□□□ 0.67
SLC6A4-205ENST00000579221 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
SLC6A4-205ENST00000579221 RWDD1Q9H446 243 aaPredicted RBP19.22■□□□□ 0.67
SLC6A4-205ENST00000579221 HDAC1Q13547 482 aaPredicted RBP19.21■□□□□ 0.67
SLC6A4-205ENST00000579221 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
SLC6A4-205ENST00000579221 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
SLC6A4-205ENST00000579221 COA1Q9GZY4 146 aa19.21■□□□□ 0.67
SLC6A4-205ENST00000579221 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
SLC6A4-205ENST00000579221 ZNRF3Q9ULT6 936 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms