RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
BRIP1-204ENST00000579028 RASAL3Q86YV0 1011 aa11.47□□□□□ -0.57
BRIP1-204ENST00000579028 SULF1Q8IWU6 871 aa11.47□□□□□ -0.57
BRIP1-204ENST00000579028 GGA3Q9NZ52 723 aa11.47□□□□□ -0.57
BRIP1-204ENST00000579028 TRMT112Q9UI30 125 aaKnown RBP11.47□□□□□ -0.57
BRIP1-204ENST00000579028 ZNF609O15014 1411 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 ECE2O60344 883 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 ANXA1P04083 346 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 EIF2S2P20042 333 aaKnown RBP11.46□□□□□ -0.57
BRIP1-204ENST00000579028 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.57
BRIP1-204ENST00000579028 COPS6Q7L5N1 327 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 CCER1Q8TC90 406 aaPredicted RBP11.46□□□□□ -0.57
BRIP1-204ENST00000579028 CDCA5Q96FF9 252 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 KCNQ5Q9NR82 932 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
BRIP1-204ENST00000579028 NSFL1CQ9UNZ2 370 aaKnown RBP11.46□□□□□ -0.57
BRIP1-204ENST00000579028 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.58
BRIP1-204ENST00000579028 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
BRIP1-204ENST00000579028 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
BRIP1-204ENST00000579028 VIL1P09327 827 aaKnown RBP11.45□□□□□ -0.58
BRIP1-204ENST00000579028 FKBP1BP68106 108 aa11.45□□□□□ -0.58
BRIP1-204ENST00000579028 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
BRIP1-204ENST00000579028 XAGE3Q8WTP9 111 aa11.45□□□□□ -0.58
BRIP1-204ENST00000579028 CELF1Q92879 486 aaKnown RBP11.45□□□□□ -0.58
BRIP1-204ENST00000579028 EYA3Q99504 573 aa11.45□□□□□ -0.58
BRIP1-204ENST00000579028 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
BRIP1-204ENST00000579028 ASTN2O75129 1339 aaPredicted RBP11.44□□□□□ -0.58
BRIP1-204ENST00000579028 COL4A1P02462 1669 aa11.44□□□□□ -0.58
BRIP1-204ENST00000579028 C6orf229H3BNL8 230 aa11.44□□□□□ -0.58
BRIP1-204ENST00000579028 GPSM2P81274 684 aa11.44□□□□□ -0.58
BRIP1-204ENST00000579028 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
BRIP1-204ENST00000579028 DOK7Q18PE1 504 aa11.44□□□□□ -0.58
BRIP1-204ENST00000579028 NOM1Q5C9Z4 860 aaKnown RBP11.44□□□□□ -0.58
BRIP1-204ENST00000579028 BABAM1Q9NWV8 329 aa11.44□□□□□ -0.58
BRIP1-204ENST00000579028 ZNF280AP59817 542 aaPredicted RBP11.43□□□□□ -0.58
BRIP1-204ENST00000579028 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
BRIP1-204ENST00000579028 TBC1D16Q8TBP0 767 aa11.43□□□□□ -0.58
BRIP1-204ENST00000579028 ZNF296Q8WUU4 475 aaPredicted RBP11.43□□□□□ -0.58
BRIP1-204ENST00000579028 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
BRIP1-204ENST00000579028 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
BRIP1-204ENST00000579028 PSME4Q14997 1843 aa11.43□□□□□ -0.58
BRIP1-204ENST00000579028 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
BRIP1-204ENST00000579028 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
BRIP1-204ENST00000579028 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
BRIP1-204ENST00000579028 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
BRIP1-204ENST00000579028 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
BRIP1-204ENST00000579028 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
BRIP1-204ENST00000579028 TBC1D8O95759 1140 aa11.41□□□□□ -0.58
BRIP1-204ENST00000579028 SCARF1Q14162 830 aa11.41□□□□□ -0.58
BRIP1-204ENST00000579028 FBXO46Q6PJ61 603 aaPredicted RBP11.41□□□□□ -0.58
BRIP1-204ENST00000579028 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
BRIP1-204ENST00000579028 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
BRIP1-204ENST00000579028 ISCA1Q9BUE6 129 aa11.41□□□□□ -0.58
BRIP1-204ENST00000579028 ZC3H12CQ9C0D7 883 aaKnown RBP11.41□□□□□ -0.58
BRIP1-204ENST00000579028 PNNQ9H307 717 aaKnown RBP11.41□□□□□ -0.58
BRIP1-204ENST00000579028 GPR25O00155 361 aa11.4□□□□□ -0.58
BRIP1-204ENST00000579028 TM4SF4P48230 202 aa11.4□□□□□ -0.58
BRIP1-204ENST00000579028 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
BRIP1-204ENST00000579028 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
BRIP1-204ENST00000579028 GMLQ99445 158 aa11.4□□□□□ -0.58
BRIP1-204ENST00000579028 CFHR5Q9BXR6 569 aa11.4□□□□□ -0.58
BRIP1-204ENST00000579028 MOB2Q70IA6 237 aa11.39□□□□□ -0.59
BRIP1-204ENST00000579028 ZNF428Q96B54 188 aa11.39□□□□□ -0.59
BRIP1-204ENST00000579028 ATP5J2-PTCD1G3V325 749 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 G3V3G9 751 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 UBE2Q2LH0YL09 131 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 UFL1O94874 794 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 USP17L8P0C7I0 530 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
BRIP1-204ENST00000579028 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 MYOZ2Q9NPC6 264 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
BRIP1-204ENST00000579028 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
BRIP1-204ENST00000579028 FKTNO75072 461 aa11.37□□□□□ -0.59
BRIP1-204ENST00000579028 RIPK4P57078 832 aa11.37□□□□□ -0.59
BRIP1-204ENST00000579028 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
BRIP1-204ENST00000579028 HABP4Q5JVS0 413 aaKnown RBP11.37□□□□□ -0.59
BRIP1-204ENST00000579028 ANKIB1Q9P2G1 1089 aa11.37□□□□□ -0.59
BRIP1-204ENST00000579028 USP17L3A6NCW0 530 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 USP17L4A6NCW7 530 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 CHL1O00533 1208 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 SREBF2Q12772 1141 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
BRIP1-204ENST00000579028 KRT24Q2M2I5 525 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
BRIP1-204ENST00000579028 USP17L1Q7RTZ2 530 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
BRIP1-204ENST00000579028 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
BRIP1-204ENST00000579028 HOXB7P09629 217 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
BRIP1-204ENST00000579028 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 HDGFL1Q5TGJ6 251 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 PODNQ7Z5L7 613 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 DBF4Q9UBU7 674 aaPredicted RBP11.35□□□□□ -0.59
BRIP1-204ENST00000579028 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
BRIP1-204ENST00000579028 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms