RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RASSF10A6NK89 507 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 H7C1D1 291 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 FOXN1O15353 648 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CWF19L2Q2TBE0 894 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 G2E3Q7L622 706 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 GLIS2Q9BZE0 524 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 WDR33Q9C0J8 1336 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CELF2O95319 508 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 IGKV5-2P06315 115 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CTSWP56202 376 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CYP4F22Q6NT55 531 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 IL16Q14005 1332 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
CDK5RAP3-211ENST00000578996 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 TBC1D10BQ4KMP7 808 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CST9Q5W186 159 aa11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 FAM9BQ8IZU0 186 aa11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-211ENST00000578996 NEURL1BA8MQ27 555 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 ECE1P42892 770 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 FLIIQ13045 1269 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 UBE3BQ7Z3V4 1068 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 DPF2Q92785 391 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 CAPNS2Q96L46 248 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 GREM2Q9H772 168 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 XDHP47989 1333 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 RTL9Q8NET4 1388 aa11.78□□□□□ -0.52
CDK5RAP3-211ENST00000578996 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 CDC37L1Q7L3B6 337 aa11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 WBP1LQ9NX94 342 aa11.77□□□□□ -0.53
CDK5RAP3-211ENST00000578996 EGFRP00533 1210 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ATP2B4P23634 1241 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 LBX1P52954 281 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 KIF4BQ2VIQ3 1234 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 WDR63Q8IWG1 891 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 DNAAF4Q8WXU2 420 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
CDK5RAP3-211ENST00000578996 AOC2O75106 756 aa11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 VAMP4O75379 141 aa11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 VIL1P09327 827 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 GCKRQ14397 625 aa11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 KRT26Q7Z3Y9 468 aa11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SAPCD2Q86UD0 394 aa11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-211ENST00000578996 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 WTIPA6NIX2 430 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ADM5C9JUS6 153 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 H7C1W4 665 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ITGA6P23229 1130 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 PRDM10Q9NQV6 1147 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 BSDC1Q9NW68 430 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 GGA3Q9NZ52 723 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
CDK5RAP3-211ENST00000578996 F6X3S4 739 aa11.73□□□□□ -0.53
CDK5RAP3-211ENST00000578996 HSPA8P11142 646 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-211ENST00000578996 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-211ENST00000578996 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
CDK5RAP3-211ENST00000578996 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MED23Q9ULK4 1368 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ASTN2O75129 1339 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 KCNJ4P48050 445 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 HUNKP57058 714 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 AGBL3Q8NEM8 1001 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
CDK5RAP3-211ENST00000578996 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SCN9AQ15858 1988 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MYH3P11055 1940 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms