RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 TTC41PQ6P2S7 1318 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
RTTN-202ENST00000578780 GPTP24298 496 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
RTTN-202ENST00000578780 TERF2Q15554 542 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 EAF2Q96CJ1 260 aaPredicted RBP11.98□□□□□ -0.49
RTTN-202ENST00000578780 GJD4Q96KN9 370 aaPredicted RBP11.98□□□□□ -0.49
RTTN-202ENST00000578780 ERVV-1B6SEH8 477 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 MAP4K4O95819 1239 aaPredicted RBP11.98□□□□□ -0.49
RTTN-202ENST00000578780 EIF5P55010 431 aaKnown RBP11.98□□□□□ -0.49
RTTN-202ENST00000578780 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
RTTN-202ENST00000578780 FAM89AQ96GI7 184 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 ECHDC1Q9NTX5 307 aa11.98□□□□□ -0.49
RTTN-202ENST00000578780 ERC2O15083 957 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
RTTN-202ENST00000578780 BAG4O95429 457 aaKnown RBP11.97□□□□□ -0.49
RTTN-202ENST00000578780 APPP05067 770 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
RTTN-202ENST00000578780 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 ZBTB38Q8NAP3 1195 aaPredicted RBP11.97□□□□□ -0.49
RTTN-202ENST00000578780 PIBF1Q8WXW3 757 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 CCDC8Q9H0W5 538 aaPredicted RBP11.97□□□□□ -0.49
RTTN-202ENST00000578780 FEZ2Q9UHY8 353 aaPredicted RBP11.97□□□□□ -0.49
RTTN-202ENST00000578780 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 CALCOCO1Q9P1Z2 691 aa11.97□□□□□ -0.49
RTTN-202ENST00000578780 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 REC8O95072 547 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 CHMLP26374 656 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 TFCP2Q12800 502 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.49
RTTN-202ENST00000578780 FAM182BQ5T319 152 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 PTF1AQ7RTS3 328 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 USP26Q9BXU7 913 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 TSPYL1Q9H0U9 437 aa11.96□□□□□ -0.49
RTTN-202ENST00000578780 TUBGCP6Q96RT7 1819 aa11.96□□□□□ -0.5
RTTN-202ENST00000578780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
RTTN-202ENST00000578780 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
RTTN-202ENST00000578780 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
RTTN-202ENST00000578780 THSD7AQ9UPZ6 1657 aa11.95□□□□□ -0.5
RTTN-202ENST00000578780 KIF2CQ99661 725 aa11.95□□□□□ -0.5
RTTN-202ENST00000578780 ESYT1Q9BSJ8 1104 aa11.95□□□□□ -0.5
RTTN-202ENST00000578780 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
RTTN-202ENST00000578780 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
RTTN-202ENST00000578780 TRPC5Q9UL62 973 aaPredicted RBP11.95□□□□□ -0.5
RTTN-202ENST00000578780 CTIFO43310 598 aaKnown RBP11.94□□□□□ -0.5
RTTN-202ENST00000578780 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
RTTN-202ENST00000578780 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 TNNI3KQ59H18 835 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 AXDND1Q5T1B0 1012 aaPredicted RBP11.94□□□□□ -0.5
RTTN-202ENST00000578780 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
RTTN-202ENST00000578780 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 PLA2G12BQ9BX93 195 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
RTTN-202ENST00000578780 DDX41Q9UJV9 622 aaKnown RBP11.94□□□□□ -0.5
RTTN-202ENST00000578780 FPGT-TNNI3KV9GXZ4 949 aa11.94□□□□□ -0.5
RTTN-202ENST00000578780 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
RTTN-202ENST00000578780 ATRNO75882 1429 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 KCNQ4P56696 695 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.5
RTTN-202ENST00000578780 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
RTTN-202ENST00000578780 LMBRD1Q9NUN5 540 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 SPTLC3Q9NUV7 552 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 MORC2Q9Y6X9 1032 aaPredicted RBP11.93□□□□□ -0.5
RTTN-202ENST00000578780 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 ONECUT3O60422 494 aaPredicted RBP11.93□□□□□ -0.5
RTTN-202ENST00000578780 PTMAP06454 111 aaKnown RBP11.93□□□□□ -0.5
RTTN-202ENST00000578780 ATG9AQ7Z3C6 839 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
RTTN-202ENST00000578780 UBN2Q6ZU65 1347 aa11.93□□□□□ -0.5
RTTN-202ENST00000578780 EYA2O00167 538 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 CSF1RP07333 972 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 IL15P40933 162 aaPredicted RBP11.92□□□□□ -0.5
RTTN-202ENST00000578780 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 SEPT12Q8IYM1 358 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
RTTN-202ENST00000578780 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
RTTN-202ENST00000578780 RREB1Q92766 1687 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 IRS4O14654 1257 aaPredicted RBP11.92□□□□□ -0.5
RTTN-202ENST00000578780 LRSAM1Q6UWE0 723 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 BOLA2Q9H3K6 86 aa11.92□□□□□ -0.5
RTTN-202ENST00000578780 DBNLQ9UJU6 430 aaKnown RBP11.92□□□□□ -0.5
RTTN-202ENST00000578780 ANKRD36CQ5JPF3 1778 aa11.91□□□□□ -0.5
RTTN-202ENST00000578780 NUP98P52948 1817 aa11.91□□□□□ -0.5
RTTN-202ENST00000578780 CIAO1O76071 339 aa11.91□□□□□ -0.5
RTTN-202ENST00000578780 NOP2P46087 812 aaKnown RBP11.91□□□□□ -0.5
RTTN-202ENST00000578780 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
RTTN-202ENST00000578780 EVI5LQ96CN4 794 aa11.91□□□□□ -0.5
RTTN-202ENST00000578780 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
RTTN-202ENST00000578780 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
RTTN-202ENST00000578780 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
RTTN-202ENST00000578780 FAM193AP78312 1265 aa11.91□□□□□ -0.5
RTTN-202ENST00000578780 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms