RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 GPR101Q96P66 508 aaPredicted RBP20.31■□□□□ 0.84
CRLF3-203ENST00000578692 H7C1D1 291 aa20.3■□□□□ 0.84
CRLF3-203ENST00000578692 PSMD14O00487 310 aa20.3■□□□□ 0.84
CRLF3-203ENST00000578692 ECE2O60344 883 aa20.3■□□□□ 0.84
CRLF3-203ENST00000578692 DNAAF4Q8WXU2 420 aa20.3■□□□□ 0.84
CRLF3-203ENST00000578692 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
CRLF3-203ENST00000578692 GGA1Q9UJY5 639 aa20.3■□□□□ 0.84
CRLF3-203ENST00000578692 ZBTB12Q9Y330 459 aaPredicted RBP20.3■□□□□ 0.84
CRLF3-203ENST00000578692 CACNA1FO60840 1977 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 G3V3G9 751 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 UFL1O94874 794 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 FMR1Q06787 632 aaKnown RBP eCLIP20.29■□□□□ 0.84
CRLF3-203ENST00000578692 GCKRQ14397 625 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 DEFB115Q30KQ5 88 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 DCAF8Q5TAQ9 597 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 UBE3BQ7Z3V4 1068 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 DPF2Q92785 391 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 KCNQ5Q9NR82 932 aa20.29■□□□□ 0.84
CRLF3-203ENST00000578692 VEGFBP49765 207 aa20.28■□□□□ 0.84
CRLF3-203ENST00000578692 HIRAP54198 1017 aaPredicted RBP20.28■□□□□ 0.84
CRLF3-203ENST00000578692 GREM2Q9H772 168 aa20.28■□□□□ 0.84
CRLF3-203ENST00000578692 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
CRLF3-203ENST00000578692 RASSF10A6NK89 507 aa20.27■□□□□ 0.84
CRLF3-203ENST00000578692 MICALL2Q8IY33 904 aa20.27■□□□□ 0.84
CRLF3-203ENST00000578692 LINS1Q8NG48 757 aa20.27■□□□□ 0.84
CRLF3-203ENST00000578692 ZC3H15Q8WU90 426 aaKnown RBP20.27■□□□□ 0.84
CRLF3-203ENST00000578692 ABT1Q9ULW3 272 aaKnown RBP20.27■□□□□ 0.84
CRLF3-203ENST00000578692 XDHP47989 1333 aa20.26■□□□□ 0.83
CRLF3-203ENST00000578692 SHTN1A0MZ66 631 aa20.26■□□□□ 0.83
CRLF3-203ENST00000578692 TRAF5O00463 557 aa20.26■□□□□ 0.83
CRLF3-203ENST00000578692 ATP2B4P23634 1241 aa20.26■□□□□ 0.83
CRLF3-203ENST00000578692 COL13A1Q5TAT6 717 aaPredicted RBP20.26■□□□□ 0.83
CRLF3-203ENST00000578692 BSDC1Q9NW68 430 aaPredicted RBP20.26■□□□□ 0.83
CRLF3-203ENST00000578692 PCNTO95613 3336 aa20.26■□□□□ 0.83
CRLF3-203ENST00000578692 MYH3P11055 1940 aa20.26■□□□□ 0.83
CRLF3-203ENST00000578692 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
CRLF3-203ENST00000578692 CST9Q5W186 159 aa20.25■□□□□ 0.83
CRLF3-203ENST00000578692 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
CRLF3-203ENST00000578692 PLA2G12BQ9BX93 195 aa20.25■□□□□ 0.83
CRLF3-203ENST00000578692 MINPP1Q9UNW1 487 aa20.25■□□□□ 0.83
CRLF3-203ENST00000578692 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
CRLF3-203ENST00000578692 CASP7P55210 303 aa20.24■□□□□ 0.83
CRLF3-203ENST00000578692 VIL1P09327 827 aaKnown RBP20.23■□□□□ 0.83
CRLF3-203ENST00000578692 CDC37L1Q7L3B6 337 aa20.23■□□□□ 0.83
CRLF3-203ENST00000578692 SAMD7Q7Z3H4 446 aa20.23■□□□□ 0.83
CRLF3-203ENST00000578692 GLIS2Q9BZE0 524 aaPredicted RBP20.23■□□□□ 0.83
CRLF3-203ENST00000578692 TRPM7Q96QT4 1865 aa20.23■□□□□ 0.83
CRLF3-203ENST00000578692 F6X3S4 739 aa20.22■□□□□ 0.83
CRLF3-203ENST00000578692 CSF1RP07333 972 aa20.22■□□□□ 0.83
CRLF3-203ENST00000578692 IGHMBP2P38935 993 aaKnown RBP20.22■□□□□ 0.83
CRLF3-203ENST00000578692 WDR33Q9C0J8 1336 aaKnown RBP20.22■□□□□ 0.83
CRLF3-203ENST00000578692 WTIPA6NIX2 430 aaPredicted RBP20.21■□□□□ 0.83
CRLF3-203ENST00000578692 ITGA6P23229 1130 aa20.21■□□□□ 0.83
CRLF3-203ENST00000578692 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
CRLF3-203ENST00000578692 CCT4P50991 539 aaKnown RBP20.21■□□□□ 0.83
CRLF3-203ENST00000578692 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
CRLF3-203ENST00000578692 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
CRLF3-203ENST00000578692 PODNQ7Z5L7 613 aa20.21■□□□□ 0.83
CRLF3-203ENST00000578692 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
CRLF3-203ENST00000578692 SCN9AQ15858 1988 aa20.2■□□□□ 0.82
CRLF3-203ENST00000578692 CELF2O95319 508 aaKnown RBP20.2■□□□□ 0.82
CRLF3-203ENST00000578692 MPHOSPH8Q99549 860 aa20.2■□□□□ 0.82
CRLF3-203ENST00000578692 TLL2Q9Y6L7 1015 aa20.2■□□□□ 0.82
CRLF3-203ENST00000578692 EGFRP00533 1210 aa20.19■□□□□ 0.82
CRLF3-203ENST00000578692 FAM161AQ3B820 660 aa20.19■□□□□ 0.82
CRLF3-203ENST00000578692 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
CRLF3-203ENST00000578692 PAXIP1Q6ZW49 1069 aaPredicted RBP20.19■□□□□ 0.82
CRLF3-203ENST00000578692 USP48Q86UV5 1035 aa20.19■□□□□ 0.82
CRLF3-203ENST00000578692 AGBL3Q8NEM8 1001 aa20.19■□□□□ 0.82
CRLF3-203ENST00000578692 SPEF2Q9C093 1822 aa20.19■□□□□ 0.82
CRLF3-203ENST00000578692 FOXN1O15353 648 aa20.18■□□□□ 0.82
CRLF3-203ENST00000578692 ECE1P42892 770 aa20.18■□□□□ 0.82
CRLF3-203ENST00000578692 ZNF408Q9H9D4 720 aa20.18■□□□□ 0.82
CRLF3-203ENST00000578692 WBP1LQ9NX94 342 aa20.18■□□□□ 0.82
CRLF3-203ENST00000578692 LEMD3Q9Y2U8 911 aa20.18■□□□□ 0.82
CRLF3-203ENST00000578692 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 ANKRD18BA2A2Z9 1011 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 USP17L3A6NCW0 530 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 USP17L4A6NCW7 530 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 FOXO4P98177 505 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 CYP4F22Q6NT55 531 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 USP17L1Q7RTZ2 530 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 SAPCD2Q86UD0 394 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 AIDAQ96BJ3 306 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 DCPSQ96C86 337 aaKnown RBP20.17■□□□□ 0.82
CRLF3-203ENST00000578692 CAPNS2Q96L46 248 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 ANKRD2Q9GZV1 360 aa20.17■□□□□ 0.82
CRLF3-203ENST00000578692 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
CRLF3-203ENST00000578692 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
CRLF3-203ENST00000578692 MAP2K1Q02750 393 aaPredicted RBP20.15■□□□□ 0.82
CRLF3-203ENST00000578692 GRM1Q13255 1194 aa20.15■□□□□ 0.82
CRLF3-203ENST00000578692 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
CRLF3-203ENST00000578692 SLC4A10Q6U841 1118 aa20.15■□□□□ 0.82
CRLF3-203ENST00000578692 KRT26Q7Z3Y9 468 aa20.15■□□□□ 0.82
CRLF3-203ENST00000578692 GMLQ99445 158 aa20.15■□□□□ 0.82
CRLF3-203ENST00000578692 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
CRLF3-203ENST00000578692 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
CRLF3-203ENST00000578692 POLR2AP24928 1970 aaKnown RBP20.14■□□□□ 0.82
CRLF3-203ENST00000578692 GRM8O00222 908 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms