RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
CSNK1D-208ENST00000578501 TAF1P21675 1872 aa17.31■□□□□ 0.36
CSNK1D-208ENST00000578501 CSF1RP07333 972 aa17.3■□□□□ 0.36
CSNK1D-208ENST00000578501 RGS19P49795 217 aa17.3■□□□□ 0.36
CSNK1D-208ENST00000578501 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-208ENST00000578501 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-208ENST00000578501 ABT1Q9ULW3 272 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-208ENST00000578501 CCDC85CA6NKD9 419 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 KIAA2012Q0VF49 1180 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 GREM2Q9H772 168 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 COL4A1P02462 1669 aa17.29■□□□□ 0.36
CSNK1D-208ENST00000578501 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 GRM8O00222 908 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 ECE1P42892 770 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 EIF6P56537 245 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 AOC3Q16853 763 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 GPC2Q8N158 579 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 NSFL1CQ9UNZ2 370 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 COL4A5P29400 1685 aa17.28■□□□□ 0.36
CSNK1D-208ENST00000578501 GPSM2P81274 684 aa17.27■□□□□ 0.36
CSNK1D-208ENST00000578501 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
CSNK1D-208ENST00000578501 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-208ENST00000578501 MYH3P11055 1940 aa17.27■□□□□ 0.35
CSNK1D-208ENST00000578501 DUOX1Q9NRD9 1551 aa17.27■□□□□ 0.35
CSNK1D-208ENST00000578501 FOXO4P98177 505 aa17.26■□□□□ 0.35
CSNK1D-208ENST00000578501 MAP1SQ66K74 1059 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-208ENST00000578501 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-208ENST00000578501 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
CSNK1D-208ENST00000578501 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
CSNK1D-208ENST00000578501 UTYO14607 1347 aa17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 ITGA6P23229 1130 aa17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 WASHC4Q2M389 1173 aa17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 EYA3Q99504 573 aa17.25■□□□□ 0.35
CSNK1D-208ENST00000578501 C6orf229H3BNL8 230 aa17.24■□□□□ 0.35
CSNK1D-208ENST00000578501 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
CSNK1D-208ENST00000578501 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 PAXIP1Q6ZW49 1069 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 CAPNS2Q96L46 248 aa17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 NOB1Q9ULX3 412 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 ADAMTSL1Q8N6G6 1762 aa17.23■□□□□ 0.35
CSNK1D-208ENST00000578501 XDHP47989 1333 aa17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 CXCL9Q07325 125 aa17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 ARHGAP45Q92619 1136 aa17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
CSNK1D-208ENST00000578501 UFL1O94874 794 aa17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 ATP2B4P23634 1241 aa17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 ZC3H12CQ9C0D7 883 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-208ENST00000578501 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
CSNK1D-208ENST00000578501 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 CA12O43570 354 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 MAP2K2P36507 400 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 TNIP1Q15025 636 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 KAZALD1Q96I82 304 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
CSNK1D-208ENST00000578501 RIMBP2O15034 1052 aa17.19■□□□□ 0.34
CSNK1D-208ENST00000578501 SCNN1DP51172 638 aa17.19■□□□□ 0.34
CSNK1D-208ENST00000578501 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
CSNK1D-208ENST00000578501 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
CSNK1D-208ENST00000578501 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
CSNK1D-208ENST00000578501 ANKRD2Q9GZV1 360 aa17.19■□□□□ 0.34
CSNK1D-208ENST00000578501 RABL6Q3YEC7 729 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-208ENST00000578501 LEMD3Q9Y2U8 911 aa17.18■□□□□ 0.34
CSNK1D-208ENST00000578501 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
CSNK1D-208ENST00000578501 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 ECE2O60344 883 aa17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 RAD17O75943 681 aa17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 GRM1Q13255 1194 aa17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
CSNK1D-208ENST00000578501 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-208ENST00000578501 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
CSNK1D-208ENST00000578501 TLL2Q9Y6L7 1015 aa17.16■□□□□ 0.34
CSNK1D-208ENST00000578501 THSD7BQ9C0I4 1608 aa17.16■□□□□ 0.34
CSNK1D-208ENST00000578501 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms