RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SVOPQ8N4V2 548 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 WHAMMQ8TF30 809 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 SPACA7Q96KW9 195 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 NSUN5Q96P11 429 aaKnown RBP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 CSRNP1Q96S65 589 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 RBSNQ9H1K0 784 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 CHRDQ9H2X0 955 aa3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 CCDC9Q9Y3X0 531 aaKnown RBP3.91□□□□□ -1.78
PTP4A1-204ENST00000578299 LOC102724428A0A0B4J2F2 783 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 SHISA8B8ZZ34 492 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 EREGO14944 169 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 KIF4AO95239 1232 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 GHRHP01286 108 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 CYP2E1P05181 493 aaPredicted RBP3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 EDN3P14138 238 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 EIF2AK2P19525 551 aaKnown RBP3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 AMPD1P23109 780 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 SIK1P57059 783 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 FGD1P98174 961 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 MLLT1Q03111 559 aaPredicted RBP3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 ENOX2Q16206 610 aaKnown RBP3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 CHSY3Q70JA7 882 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 FAM35AQ86V20 835 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 NCAPG2Q86XI2 1143 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 NPAS4Q8IUM7 802 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 ZSCAN1Q8NBB4 408 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 BTBD6Q96KE9 485 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 PODXL2Q9NZ53 605 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 FRRS1LQ9P0K9 344 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 KANSL3Q9P2N6 904 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 SALL4Q9UJQ4 1053 aa3.9□□□□□ -1.79
PTP4A1-204ENST00000578299 PNMA6FA0A0J9YX94 578 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 J3QW42 95 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 ARHGEF15O94989 841 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 P4HBP07237 508 aaKnown RBP3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 CPB1P15086 417 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 MAPK8P45983 427 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 ATP2B2Q01814 1243 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 EAPPQ56P03 285 aaPredicted RBP3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 COL13A1Q5TAT6 717 aaPredicted RBP3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 ALG1LQ6GMV1 187 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 ELMSAN1Q6PJG2 1045 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 HFE2Q6ZVN8 426 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 GALNT12Q8IXK2 581 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 MICALL1Q8N3F8 863 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 CEP120Q8N960 986 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 NEDD1Q8NHV4 660 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 FBF1Q8TES7 1133 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 TTC9Q92623 222 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 NAGPAQ9UK23 515 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 STARD13Q9Y3M8 1113 aa3.89□□□□□ -1.79
PTP4A1-204ENST00000578299 RGS9O75916 674 aaPredicted RBP3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 POLR3DP05423 398 aaPredicted RBP3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 LDHBP07195 334 aaKnown RBP3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 PERM1Q5SV97 790 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 USPL1Q5W0Q7 1092 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 PSAPL1Q6NUJ1 521 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 C20orf204Q6ZNR8 217 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 CCDC74AQ96AQ1 378 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 LPIN3Q9BQK8 851 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 SMG9Q9H0W8 520 aaKnown RBP3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 PRDM6Q9NQX0 595 aa3.88□□□□□ -1.79
PTP4A1-204ENST00000578299 M0R082 166 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 PIK3R2O00459 728 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 LILRB5O75023 590 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 PRPF40AO75400 957 aaKnown RBP3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 SMNDC1O75940 238 aaKnown RBP eCLIP3.87□□□□□ -1.795e-7■□□□□ 10
PTP4A1-204ENST00000578299 ALBP02768 609 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 DGKGP49619 791 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 KIAA0319Q5VV43 1072 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 CACTIN-AS1Q8N1I8 211 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 TMEM102Q8N9M5 508 aaPredicted RBP3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 ZNF417Q8TAU3 575 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 NUDT8Q8WV74 236 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 PLD4Q96BZ4 506 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 FRMD6Q96NE9 622 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 ZNF587Q96SQ5 575 aaPredicted RBP3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 OSMRQ99650 979 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 PBX4Q9BYU1 374 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 RRAGCQ9HB90 399 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 JPH1Q9HDC5 661 aaPredicted RBP3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 NPHS2Q9NP85 383 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 DZANK1Q9NVP4 752 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 NLRP2Q9NX02 1062 aa3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.87□□□□□ -1.79
PTP4A1-204ENST00000578299 A0A1W2PP55 124 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 FAM181BA6NEQ2 426 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 FAM177BA6PVY3 158 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 GADD45BO75293 160 aaPredicted RBP3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 HOXB4P17483 251 aaPredicted RBP3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 ATP11AP98196 1134 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 ZNF326Q5BKZ1 582 aaKnown RBP3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 PEAR1Q5VY43 1037 aaPredicted RBP3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 CEP135Q66GS9 1140 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 FBXO33Q7Z6M2 555 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 RGS22Q8NE09 1264 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 EPS8L3Q8TE67 593 aaKnown RBP3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 ZKSCAN3Q9BRR0 538 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 BCL2L13Q9BXK5 485 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms