RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SPEF2Q9C093 1822 aa29.1■■■□□ 2.25
LIMD2-204ENST00000578297 EIF6P56537 245 aaKnown RBP29.09■■■□□ 2.25
LIMD2-204ENST00000578297 EYA3Q99504 573 aa29.09■■■□□ 2.25
LIMD2-204ENST00000578297 MPHOSPH8Q99549 860 aa29.09■■■□□ 2.25
LIMD2-204ENST00000578297 GGA1Q9UJY5 639 aa29.09■■■□□ 2.25
LIMD2-204ENST00000578297 XDHP47989 1333 aa29.09■■■□□ 2.25
LIMD2-204ENST00000578297 TRIM27P14373 513 aa29.08■■■□□ 2.25
LIMD2-204ENST00000578297 VEGFAP15692 232 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-204ENST00000578297 CCDC57Q2TAC2 916 aa29.08■■■□□ 2.25
LIMD2-204ENST00000578297 RABL6Q3YEC7 729 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-204ENST00000578297 INTS3Q68E01 1043 aaKnown RBP29.08■■■□□ 2.25
LIMD2-204ENST00000578297 BICC1Q9H694 974 aaKnown RBP29.08■■■□□ 2.25
LIMD2-204ENST00000578297 POTECB2RU33 542 aa29.07■■■□□ 2.24
LIMD2-204ENST00000578297 ZNRF3Q9ULT6 936 aa29.07■■■□□ 2.24
LIMD2-204ENST00000578297 UFL1O94874 794 aa29.06■■■□□ 2.24
LIMD2-204ENST00000578297 ATP2B4P23634 1241 aa29.06■■■□□ 2.24
LIMD2-204ENST00000578297 C1QTNF8P60827 252 aa29.06■■■□□ 2.24
LIMD2-204ENST00000578297 ZKSCAN2Q63HK3 967 aa29.06■■■□□ 2.24
LIMD2-204ENST00000578297 GPC2Q8N158 579 aa29.06■■■□□ 2.24
LIMD2-204ENST00000578297 L3MBTL3Q96JM7 780 aaPredicted RBP29.06■■■□□ 2.24
LIMD2-204ENST00000578297 RIMBP2O15034 1052 aa29.04■■■□□ 2.24
LIMD2-204ENST00000578297 TOMM70O94826 608 aa29.04■■■□□ 2.24
LIMD2-204ENST00000578297 ANKRD44Q8N8A2 993 aa29.04■■■□□ 2.24
LIMD2-204ENST00000578297 C16orf71Q8IYS4 520 aaPredicted RBP29.03■■■□□ 2.24
LIMD2-204ENST00000578297 GPR101Q96P66 508 aaPredicted RBP29.03■■■□□ 2.24
LIMD2-204ENST00000578297 ZC3H12CQ9C0D7 883 aaKnown RBP29.03■■■□□ 2.24
LIMD2-204ENST00000578297 ANKRD2Q9GZV1 360 aa29.03■■■□□ 2.24
LIMD2-204ENST00000578297 UBTFL1P0CB47 393 aaPredicted RBP29.02■■■□□ 2.24
LIMD2-204ENST00000578297 TAF7LQ5H9L4 462 aa29.02■■■□□ 2.24
LIMD2-204ENST00000578297 TNNQ9UQP3 1299 aa29.02■■■□□ 2.24
LIMD2-204ENST00000578297 ZNF594Q96JF6 807 aaPredicted RBP29.01■■■□□ 2.23
LIMD2-204ENST00000578297 HDAC5Q9UQL6 1122 aa29.01■■■□□ 2.23
LIMD2-204ENST00000578297 LEMD3Q9Y2U8 911 aa29.01■■■□□ 2.23
LIMD2-204ENST00000578297 IQCA1LA6NCM1 817 aa29■■■□□ 2.23
LIMD2-204ENST00000578297 CHRNDQ07001 517 aa29■■■□□ 2.23
LIMD2-204ENST00000578297 CXCL9Q07325 125 aa29■■■□□ 2.23
LIMD2-204ENST00000578297 LDHAL6AQ6ZMR3 332 aa29■■■□□ 2.23
LIMD2-204ENST00000578297 CLUAP1Q96AJ1 413 aa29■■■□□ 2.23
LIMD2-204ENST00000578297 GJA3Q9Y6H8 435 aa29■■■□□ 2.23
LIMD2-204ENST00000578297 SCN4AP35499 1836 aa28.99■■■□□ 2.23
LIMD2-204ENST00000578297 YDJCA8MPS7 323 aa28.99■■■□□ 2.23
LIMD2-204ENST00000578297 DBNDD1Q9H9R9 158 aa28.99■■■□□ 2.23
LIMD2-204ENST00000578297 WTIPA6NIX2 430 aaPredicted RBP28.98■■■□□ 2.23
LIMD2-204ENST00000578297 RBM46Q8TBY0 533 aaKnown RBP28.98■■■□□ 2.23
LIMD2-204ENST00000578297 MEIS3Q99687 375 aa28.98■■■□□ 2.23
LIMD2-204ENST00000578297 ECE2O60344 883 aa28.97■■■□□ 2.23
LIMD2-204ENST00000578297 TNIP1Q15025 636 aa28.97■■■□□ 2.23
LIMD2-204ENST00000578297 DOK7Q18PE1 504 aa28.97■■■□□ 2.23
LIMD2-204ENST00000578297 CIAPIN1Q6FI81 312 aa28.97■■■□□ 2.23
LIMD2-204ENST00000578297 CNNM1Q9NRU3 951 aa28.97■■■□□ 2.23
LIMD2-204ENST00000578297 MED23Q9ULK4 1368 aa28.97■■■□□ 2.23
LIMD2-204ENST00000578297 GNAI3P08754 354 aa28.96■■■□□ 2.23
LIMD2-204ENST00000578297 HACL1Q9UJ83 578 aa28.96■■■□□ 2.23
LIMD2-204ENST00000578297 ZNF804BA4D1E1 1349 aa28.95■■■□□ 2.23
LIMD2-204ENST00000578297 RAD17O75943 681 aa28.95■■■□□ 2.22
LIMD2-204ENST00000578297 TMEM57Q8N5G2 664 aa28.95■■■□□ 2.22
LIMD2-204ENST00000578297 G3V3G9 751 aa28.94■■■□□ 2.22
LIMD2-204ENST00000578297 DCAF8Q5TAQ9 597 aa28.94■■■□□ 2.22
LIMD2-204ENST00000578297 TAF1DQ9H5J8 278 aaPredicted RBP28.94■■■□□ 2.22
LIMD2-204ENST00000578297 LRRFIP2Q9Y608 721 aaKnown RBP28.94■■■□□ 2.22
LIMD2-204ENST00000578297 SCNN1DP51172 638 aa28.93■■■□□ 2.22
LIMD2-204ENST00000578297 FTSJ3Q8IY81 847 aaKnown RBP28.93■■■□□ 2.22
LIMD2-204ENST00000578297 DZIP1LQ8IYY4 767 aaKnown RBP28.93■■■□□ 2.22
LIMD2-204ENST00000578297 HELBQ8NG08 1087 aaPredicted RBP28.93■■■□□ 2.22
LIMD2-204ENST00000578297 PUS3Q9BZE2 481 aaKnown RBP28.93■■■□□ 2.22
LIMD2-204ENST00000578297 A0A1B0GUL6 1792 aa28.93■■■□□ 2.22
LIMD2-204ENST00000578297 TAF5LO75529 589 aa28.92■■■□□ 2.22
LIMD2-204ENST00000578297 KCNJ4P48050 445 aa28.92■■■□□ 2.22
LIMD2-204ENST00000578297 RCAN3Q9UKA8 241 aa28.92■■■□□ 2.22
LIMD2-204ENST00000578297 RIPOR2Q9Y4F9 1068 aa28.92■■■□□ 2.22
LIMD2-204ENST00000578297 LMOD1P29536 600 aaPredicted RBP28.91■■■□□ 2.22
LIMD2-204ENST00000578297 EPHX2P34913 555 aa28.91■■■□□ 2.22
LIMD2-204ENST00000578297 RFX5P48382 616 aaPredicted RBP28.91■■■□□ 2.22
LIMD2-204ENST00000578297 FSTL1Q12841 308 aa28.91■■■□□ 2.22
LIMD2-204ENST00000578297 PODNQ7Z5L7 613 aa28.91■■■□□ 2.22
LIMD2-204ENST00000578297 KCNQ5Q9NR82 932 aa28.91■■■□□ 2.22
LIMD2-204ENST00000578297 TXNRD3Q86VQ6 643 aa28.9■■■□□ 2.22
LIMD2-204ENST00000578297 SMC1BQ8NDV3 1235 aa28.9■■■□□ 2.22
LIMD2-204ENST00000578297 MROH5Q6ZUA9 1318 aa28.9■■■□□ 2.22
LIMD2-204ENST00000578297 PSMD14O00487 310 aa28.89■■■□□ 2.22
LIMD2-204ENST00000578297 RLBP1P12271 317 aa28.89■■■□□ 2.22
LIMD2-204ENST00000578297 GMPSP49915 693 aaPredicted RBP28.89■■■□□ 2.22
LIMD2-204ENST00000578297 C15orf52Q6ZUT6 534 aaKnown RBP28.89■■■□□ 2.22
LIMD2-204ENST00000578297 KLHDC4Q8TBB5 520 aa28.89■■■□□ 2.22
LIMD2-204ENST00000578297 COA1Q9GZY4 146 aa28.89■■■□□ 2.22
LIMD2-204ENST00000578297 GPRC5DQ9NZD1 345 aa28.89■■■□□ 2.22
LIMD2-204ENST00000578297 SCN9AQ15858 1988 aa28.88■■■□□ 2.21
LIMD2-204ENST00000578297 SNAP23O00161 211 aa28.88■■■□□ 2.21
LIMD2-204ENST00000578297 PLIN1O60240 522 aa28.88■■■□□ 2.21
LIMD2-204ENST00000578297 EPS15P42566 896 aa28.88■■■□□ 2.21
LIMD2-204ENST00000578297 PTPN12Q05209 780 aaKnown RBP28.88■■■□□ 2.21
LIMD2-204ENST00000578297 LRRC24Q50LG9 513 aa28.88■■■□□ 2.21
LIMD2-204ENST00000578297 PNMA8AQ86V59 439 aaPredicted RBP28.88■■■□□ 2.21
LIMD2-204ENST00000578297 IRS2Q9Y4H2 1338 aa28.88■■■□□ 2.21
LIMD2-204ENST00000578297 KLRK1P26718 216 aa28.87■■■□□ 2.21
LIMD2-204ENST00000578297 GNAI2P04899 355 aa28.86■■■□□ 2.21
LIMD2-204ENST00000578297 VIL1P09327 827 aaKnown RBP28.86■■■□□ 2.21
LIMD2-204ENST00000578297 MS4A1P11836 297 aa28.86■■■□□ 2.21
LIMD2-204ENST00000578297 POTEIP0CG38 1075 aa28.85■■■□□ 2.21
LIMD2-204ENST00000578297 POTEJP0CG39 1038 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms