RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 ADORA1P30542 326 aa20.87■□□□□ 0.93
ERBB2-205ENST00000578199 FKBP4Q02790 459 aaKnown RBP eCLIP20.87■□□□□ 0.93
ERBB2-205ENST00000578199 CCDC57Q2TAC2 916 aa20.87■□□□□ 0.93
ERBB2-205ENST00000578199 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
ERBB2-205ENST00000578199 ALDH8A1Q9H2A2 487 aaPredicted RBP20.87■□□□□ 0.93
ERBB2-205ENST00000578199 HSP90B1P14625 803 aaKnown RBP20.86■□□□□ 0.93
ERBB2-205ENST00000578199 GPTP24298 496 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 KRT32Q14532 448 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 CCDC183Q5T5S1 534 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 ZSCAN30Q86W11 494 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 GPR108Q9NPR9 543 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 HLFQ16534 295 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 BRF1Q92994 677 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 NAP1L5Q96NT1 182 aaPredicted RBP20.86■□□□□ 0.93
ERBB2-205ENST00000578199 CEP126Q9P2H0 1117 aa20.86■□□□□ 0.93
ERBB2-205ENST00000578199 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
ERBB2-205ENST00000578199 PHF14O94880 888 aa20.85■□□□□ 0.93
ERBB2-205ENST00000578199 GIMAP6Q6P9H5 292 aa20.85■□□□□ 0.93
ERBB2-205ENST00000578199 DDX11Q96FC9 970 aa20.85■□□□□ 0.93
ERBB2-205ENST00000578199 TFIP11Q9UBB9 837 aaKnown RBP20.85■□□□□ 0.93
ERBB2-205ENST00000578199 KDM4FA0A1W2PPD8 638 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 TTC6Q86TZ1 520 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 RFX7Q2KHR2 1363 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 PPFIA3O75145 1194 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 KIF6Q6ZMV9 814 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 CHST3Q7LGC8 479 aa20.84■□□□□ 0.93
ERBB2-205ENST00000578199 SYTL4Q96C24 671 aaPredicted RBP20.84■□□□□ 0.93
ERBB2-205ENST00000578199 CIAO1O76071 339 aa20.83■□□□□ 0.93
ERBB2-205ENST00000578199 FGD1P98174 961 aa20.83■□□□□ 0.93
ERBB2-205ENST00000578199 ZMYM1Q5SVZ6 1142 aa20.83■□□□□ 0.93
ERBB2-205ENST00000578199 GTF3C6Q969F1 213 aa20.83■□□□□ 0.93
ERBB2-205ENST00000578199 HELLSQ9NRZ9 838 aa20.83■□□□□ 0.93
ERBB2-205ENST00000578199 MAST3O60307 1309 aa20.83■□□□□ 0.93
ERBB2-205ENST00000578199 M0R2C6 588 aa20.83■□□□□ 0.92
ERBB2-205ENST00000578199 HSPD1P10809 573 aaKnown RBP20.83■□□□□ 0.92
ERBB2-205ENST00000578199 SCARF1Q14162 830 aa20.83■□□□□ 0.92
ERBB2-205ENST00000578199 GORABQ5T7V8 394 aa20.83■□□□□ 0.92
ERBB2-205ENST00000578199 TTLL5Q6EMB2 1281 aa20.83■□□□□ 0.92
ERBB2-205ENST00000578199 XAGE2Q96GT9 111 aa20.83■□□□□ 0.92
ERBB2-205ENST00000578199 SLC4A9Q96Q91 983 aa20.83■□□□□ 0.92
ERBB2-205ENST00000578199 HCLS1P14317 486 aaPredicted RBP20.82■□□□□ 0.92
ERBB2-205ENST00000578199 HSP90AB3PQ58FF7 597 aa20.82■□□□□ 0.92
ERBB2-205ENST00000578199 TAF7LQ5H9L4 462 aa20.82■□□□□ 0.92
ERBB2-205ENST00000578199 PI16Q6UXB8 463 aa20.82■□□□□ 0.92
ERBB2-205ENST00000578199 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
ERBB2-205ENST00000578199 MSNP26038 577 aaKnown RBP20.82■□□□□ 0.92
ERBB2-205ENST00000578199 MPNDQ8N594 471 aa20.82■□□□□ 0.92
ERBB2-205ENST00000578199 RNF113AO15541 343 aaKnown RBP20.81■□□□□ 0.92
ERBB2-205ENST00000578199 PDCP20941 246 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 SCRN1Q12765 414 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 STARD3NLO95772 234 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 FOSBP53539 338 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 APOBRQ0VD83 1088 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 TTC39AQ5SRH9 613 aa20.81■□□□□ 0.92
ERBB2-205ENST00000578199 PCCAP05165 728 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-205ENST00000578199 KRT85P78386 507 aa20.8■□□□□ 0.92
ERBB2-205ENST00000578199 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-205ENST00000578199 IFIT5Q13325 482 aaKnown RBP20.8■□□□□ 0.92
ERBB2-205ENST00000578199 CSPP1Q1MSJ5 1256 aa20.79■□□□□ 0.92
ERBB2-205ENST00000578199 CCDC158Q5M9N0 1113 aa20.79■□□□□ 0.92
ERBB2-205ENST00000578199 DHX32Q7L7V1 743 aaKnown RBP20.79■□□□□ 0.92
ERBB2-205ENST00000578199 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
ERBB2-205ENST00000578199 NAP1L2Q9ULW6 460 aaPredicted RBP20.79■□□□□ 0.92
ERBB2-205ENST00000578199 LAMA4Q16363 1823 aa20.79■□□□□ 0.92
ERBB2-205ENST00000578199 E7EWF7 191 aa20.79■□□□□ 0.92
ERBB2-205ENST00000578199 CCT2P78371 535 aaKnown RBP20.79■□□□□ 0.92
ERBB2-205ENST00000578199 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
ERBB2-205ENST00000578199 MAP3K15Q6ZN16 1313 aa20.79■□□□□ 0.92
ERBB2-205ENST00000578199 LIG1P18858 919 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 ZAP70P43403 619 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 TRIM28Q13263 835 aaKnown RBP20.78■□□□□ 0.92
ERBB2-205ENST00000578199 WASHC4Q2M389 1173 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 TEX13AQ9BXU3 409 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-205ENST00000578199 GREM2Q9H772 168 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 CSF1RP07333 972 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 CAMK4Q16566 473 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 USP25Q9UHP3 1055 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 NOL7Q9UMY1 257 aaKnown RBP20.78■□□□□ 0.92
ERBB2-205ENST00000578199 ZBTB1Q9Y2K1 713 aa20.78■□□□□ 0.92
ERBB2-205ENST00000578199 HAND2P61296 217 aa20.77■□□□□ 0.92
ERBB2-205ENST00000578199 NLRP10Q86W26 655 aa20.77■□□□□ 0.92
ERBB2-205ENST00000578199 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
ERBB2-205ENST00000578199 TBC1D2BQ9UPU7 963 aa20.77■□□□□ 0.92
ERBB2-205ENST00000578199 ITGB4P16144 1822 aa20.77■□□□□ 0.92
ERBB2-205ENST00000578199 CYP19A1P11511 503 aaPredicted RBP20.76■□□□□ 0.91
ERBB2-205ENST00000578199 ITGA6P23229 1130 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 EXOSC10Q01780 885 aaKnown RBP20.76■□□□□ 0.91
ERBB2-205ENST00000578199 LDHAL6AQ6ZMR3 332 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 AKAP2Q9Y2D5 859 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 LETM1O95202 739 aaPredicted RBP20.76■□□□□ 0.91
ERBB2-205ENST00000578199 HS1BP3Q53T59 392 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 SPATA32Q96LK8 384 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 FUCA2Q9BTY2 467 aa20.76■□□□□ 0.91
ERBB2-205ENST00000578199 GPHNQ9NQX3 736 aaPredicted RBP20.76■□□□□ 0.91
ERBB2-205ENST00000578199 A0A0G2JS52 829 aa20.75■□□□□ 0.91
ERBB2-205ENST00000578199 H3BQV1 296 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms