RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 C8orf58Q8NAV2 365 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 IP6K1Q92551 441 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 C19orf44Q9H6X5 657 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
KRT39-203ENST00000578078 DDX41Q9UJV9 622 aaKnown RBP8.28□□□□□ -1.08
KRT39-203ENST00000578078 G3V3G9 751 aa8.27□□□□□ -1.08
KRT39-203ENST00000578078 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.08
KRT39-203ENST00000578078 ATF3P18847 181 aa8.27□□□□□ -1.08
KRT39-203ENST00000578078 HDAC1Q13547 482 aaPredicted RBP8.27□□□□□ -1.08
KRT39-203ENST00000578078 NOLC1Q14978 699 aaKnown RBP eCLIP8.27□□□□□ -1.08
KRT39-203ENST00000578078 LTV1Q96GA3 475 aaPredicted RBP8.27□□□□□ -1.08
KRT39-203ENST00000578078 LMO7Q8WWI1 1683 aa8.27□□□□□ -1.08
KRT39-203ENST00000578078 FAM208AQ9UK61 1670 aaKnown RBP8.27□□□□□ -1.08
KRT39-203ENST00000578078 MAP3K5Q99683 1374 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 ABCC4O15439 1325 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 GNAT3A8MTJ3 354 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L15C9J2P7 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L10C9JJH3 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L13C9JLJ4 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L11C9JVI0 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L21D6R901 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L18D6R9N7 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L22D6RA61 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L17D6RBQ6 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L19D6RCP7 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L20D6RJB6 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 FOXO3O43524 673 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 BAG4O95429 457 aaKnown RBP8.27□□□□□ -1.09
KRT39-203ENST00000578078 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 USP17L24Q0WX57 530 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 SYAP1Q96A49 352 aaPredicted RBP8.27□□□□□ -1.09
KRT39-203ENST00000578078 ORAI2Q96SN7 254 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 ZBTB40Q9NUA8 1239 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
KRT39-203ENST00000578078 CAMTA1Q9Y6Y1 1673 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 RGPD5Q99666 1765 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 MST1RQ04912 1400 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 PIK3CDO00329 1044 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 CYP2E1P05181 493 aaPredicted RBP8.26□□□□□ -1.09
KRT39-203ENST00000578078 CRTC2Q53ET0 693 aaPredicted RBP8.26□□□□□ -1.09
KRT39-203ENST00000578078 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
KRT39-203ENST00000578078 KRT222Q8N1A0 295 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 RBSNQ9H1K0 784 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 PDZRN3Q9UPQ7 1066 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 HDAC5Q9UQL6 1122 aa8.26□□□□□ -1.09
KRT39-203ENST00000578078 PTPRCP08575 1304 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 MUM1L1Q5H9M0 696 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 KRT28Q7Z3Y7 464 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 BABAM1Q9NWV8 329 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 FAM53CQ9NYF3 392 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 CTNNA3Q9UI47 895 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 TMEM94Q12767 1356 aa8.25□□□□□ -1.09
KRT39-203ENST00000578078 XIRP1Q702N8 1843 aaKnown RBP8.25□□□□□ -1.09
KRT39-203ENST00000578078 SOS1Q07889 1333 aaPredicted RBP8.25□□□□□ -1.09
KRT39-203ENST00000578078 N4BP2Q86UW6 1770 aaPredicted RBP8.25□□□□□ -1.09
KRT39-203ENST00000578078 MARCH6O60337 910 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 C6orf132Q5T0Z8 1188 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 C1orf216Q8TAB5 229 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 PIK3R5Q8WYR1 880 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
KRT39-203ENST00000578078 EGFL7Q9UHF1 273 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 KDM3BQ7LBC6 1761 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 MSH6P52701 1360 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 GCP02774 474 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 FDX1P10109 184 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 FXR2P51116 673 aaKnown RBP eCLIP8.24□□□□□ -1.09
KRT39-203ENST00000578078 HDLBPQ00341 1268 aaKnown RBP8.24□□□□□ -1.09
KRT39-203ENST00000578078 PTK7Q13308 1070 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 COL19A1Q14993 1142 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 CAVIN1Q6NZI2 390 aaKnown RBP8.24□□□□□ -1.09
KRT39-203ENST00000578078 ASB16Q96NS5 453 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 LMBRD1Q9NUN5 540 aa8.24□□□□□ -1.09
KRT39-203ENST00000578078 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
KRT39-203ENST00000578078 TMA7Q9Y2S6 64 aaKnown RBP8.24□□□□□ -1.09
KRT39-203ENST00000578078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
KRT39-203ENST00000578078 MED1Q15648 1581 aaPredicted RBP8.23□□□□□ -1.09
KRT39-203ENST00000578078 STRCQ7RTU9 1775 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 ABCC6O95255 1503 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
KRT39-203ENST00000578078 ZBTB7BO15156 539 aaPredicted RBP8.23□□□□□ -1.09
KRT39-203ENST00000578078 HOXA2O43364 376 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 LZTS3O60299 673 aaPredicted RBP8.23□□□□□ -1.09
KRT39-203ENST00000578078 REC8O95072 547 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 CD44P16070 742 aaKnown RBP8.23□□□□□ -1.09
KRT39-203ENST00000578078 SCNN1AP37088 669 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 PRSS12P56730 875 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 USP46P62068 366 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 ARHGEF25Q86VW2 580 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 MYCBPQ99417 103 aaPredicted RBP8.23□□□□□ -1.09
KRT39-203ENST00000578078 NCAPGQ9BPX3 1015 aa8.23□□□□□ -1.09
KRT39-203ENST00000578078 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms