RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 ZFYVE1Q9HBF4 777 aa6.94□□□□□ -1.3
KRT39-202ENST00000578029 TTLL8A6PVC2 850 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
KRT39-202ENST00000578029 EIF4A3P38919 411 aaKnown RBP6.93□□□□□ -1.3
KRT39-202ENST00000578029 FCGRTP55899 365 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 KCNQ4P56696 695 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 PRR20EP86478 221 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 PRR20CP86479 221 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 PRR20DP86480 221 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 PRR20BP86481 221 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 PRR20AP86496 221 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 PRPF40BQ6NWY9 871 aaKnown RBP6.93□□□□□ -1.3
KRT39-202ENST00000578029 MRPL14Q6P1L8 145 aaKnown RBP6.93□□□□□ -1.3
KRT39-202ENST00000578029 SV2BQ7L1I2 683 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 NBPF4Q96M43 638 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 TMEM74Q96NL1 305 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 KCNH4Q9UQ05 1017 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 TBX22Q9Y458 520 aa6.93□□□□□ -1.3
KRT39-202ENST00000578029 SASH3O75995 380 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 F11P03951 625 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
KRT39-202ENST00000578029 CCINQ13939 588 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 SCARF1Q14162 830 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 PEAR1Q5VY43 1037 aaPredicted RBP6.92□□□□□ -1.3
KRT39-202ENST00000578029 ZNF746Q6NUN9 644 aaPredicted RBP6.92□□□□□ -1.3
KRT39-202ENST00000578029 DTHD1Q6ZMT9 781 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 TRIM67Q6ZTA4 783 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 OR13H1Q8NG92 308 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 MRFAP1L1Q96HT8 127 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 OXCT2Q9BYC2 517 aaPredicted RBP6.92□□□□□ -1.3
KRT39-202ENST00000578029 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
KRT39-202ENST00000578029 RUBCNLQ9H714 662 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 GPAMQ9HCL2 828 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 LATS2Q9NRM7 1088 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 ADAMTS1Q9UHI8 967 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 STRIP2Q9ULQ0 834 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 AKAP2Q9Y2D5 859 aa6.92□□□□□ -1.3
KRT39-202ENST00000578029 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
KRT39-202ENST00000578029 CYP2E1P05181 493 aaPredicted RBP6.91□□□□□ -1.3
KRT39-202ENST00000578029 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
KRT39-202ENST00000578029 COL9A2Q14055 689 aaPredicted RBP6.91□□□□□ -1.3
KRT39-202ENST00000578029 BMS1Q14692 1282 aaKnown RBP6.91□□□□□ -1.3
KRT39-202ENST00000578029 EFHC2Q5JST6 749 aa6.91□□□□□ -1.3
KRT39-202ENST00000578029 ZNF296Q8WUU4 475 aaPredicted RBP6.91□□□□□ -1.3
KRT39-202ENST00000578029 LIN7BQ9HAP6 207 aa6.91□□□□□ -1.3
KRT39-202ENST00000578029 DYRK1BQ9Y463 629 aa6.91□□□□□ -1.3
KRT39-202ENST00000578029 CLSTN1O94985 981 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
KRT39-202ENST00000578029 MAP3K10Q02779 954 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 LBRQ14739 615 aaKnown RBP6.9□□□□□ -1.3
KRT39-202ENST00000578029 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 EGFLAMQ63HQ2 1017 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 FIGNL1Q6PIW4 674 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 ZNF662Q6ZS27 426 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 KRT25Q7Z3Z0 450 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 MKL1Q969V6 931 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 TRIM56Q9BRZ2 755 aaKnown RBP6.9□□□□□ -1.3
KRT39-202ENST00000578029 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 ABCB6Q9NP58 842 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.3
KRT39-202ENST00000578029 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.3
KRT39-202ENST00000578029 FIGNL2A6NMB9 653 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 MMP20O60882 483 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 RARAP10276 462 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
KRT39-202ENST00000578029 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 GAS2L1Q99501 681 aaPredicted RBP6.89□□□□□ -1.31
KRT39-202ENST00000578029 GSX2Q9BZM3 304 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 CEP44Q9C0F1 390 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 ZNF408Q9H9D4 720 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 EFCC1Q9HA90 598 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 SBNO2Q9Y2G9 1366 aa6.89□□□□□ -1.31
KRT39-202ENST00000578029 SOS2Q07890 1332 aaPredicted RBP6.88□□□□□ -1.31
KRT39-202ENST00000578029 F6X3S4 739 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
KRT39-202ENST00000578029 PSAPP07602 524 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 FAM157BP0CG42 384 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
KRT39-202ENST00000578029 MAP3K11Q16584 847 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 CPLX3Q8WVH0 158 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 TCF12Q99081 682 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 GINM1Q9NU53 330 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 SIRPGQ9P1W8 387 aa6.88□□□□□ -1.31
KRT39-202ENST00000578029 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.88□□□□□ -1.31
KRT39-202ENST00000578029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.88□□□□□ -1.31
KRT39-202ENST00000578029 U2SURPO15042 1029 aaKnown RBP6.87□□□□□ -1.31
KRT39-202ENST00000578029 ATXN7O15265 892 aaPredicted RBP6.87□□□□□ -1.31
KRT39-202ENST00000578029 EFSO43281 561 aa6.87□□□□□ -1.31
KRT39-202ENST00000578029 SOX18P35713 384 aa6.87□□□□□ -1.31
KRT39-202ENST00000578029 SOX9P48436 509 aa6.87□□□□□ -1.31
KRT39-202ENST00000578029 LIG3P49916 1009 aa6.87□□□□□ -1.31
KRT39-202ENST00000578029 HYAL2Q12891 473 aa6.87□□□□□ -1.31
KRT39-202ENST00000578029 SERINC3Q13530 473 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms