RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 GMPSP49915 693 aaPredicted RBP12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
SUPT6H-204ENST00000577939 PTPRCP08575 1304 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 PASKQ96RG2 1323 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 ZNF609O15014 1411 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 H7C1D1 291 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 H7C1W4 665 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 GREM2Q9H772 168 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
SUPT6H-204ENST00000577939 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 EPS15P42566 896 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 HTRA3P83110 453 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 DPF2Q92785 391 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 MYH13Q9UKX3 1938 aa12.88□□□□□ -0.35
SUPT6H-204ENST00000577939 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 GRM8O00222 908 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 ITGA6P23229 1130 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 KCNJ4P48050 445 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 CHMP3Q9Y3E7 222 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 ECM29Q5VYK3 1845 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
SUPT6H-204ENST00000577939 YDJCA8MPS7 323 aa12.86□□□□□ -0.35
SUPT6H-204ENST00000577939 PSMD14O00487 310 aa12.86□□□□□ -0.35
SUPT6H-204ENST00000577939 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
SUPT6H-204ENST00000577939 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
SUPT6H-204ENST00000577939 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
SUPT6H-204ENST00000577939 THSD7BQ9C0I4 1608 aa12.86□□□□□ -0.35
SUPT6H-204ENST00000577939 F6X3S4 739 aa12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 DOK7Q18PE1 504 aa12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 CNOT7Q9UIV1 285 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 ABT1Q9ULW3 272 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
SUPT6H-204ENST00000577939 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
SUPT6H-204ENST00000577939 CASP7P55210 303 aa12.84□□□□□ -0.35
SUPT6H-204ENST00000577939 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
SUPT6H-204ENST00000577939 AGBL3Q8NEM8 1001 aa12.84□□□□□ -0.35
SUPT6H-204ENST00000577939 SMC4Q9NTJ3 1288 aa12.84□□□□□ -0.35
SUPT6H-204ENST00000577939 MINPP1Q9UNW1 487 aa12.84□□□□□ -0.35
SUPT6H-204ENST00000577939 CSF1RP07333 972 aa12.83□□□□□ -0.36
SUPT6H-204ENST00000577939 SLFN5Q08AF3 891 aa12.83□□□□□ -0.36
SUPT6H-204ENST00000577939 GPR101Q96P66 508 aaPredicted RBP12.83□□□□□ -0.36
SUPT6H-204ENST00000577939 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
SUPT6H-204ENST00000577939 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
SUPT6H-204ENST00000577939 USP17L3A6NCW0 530 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 USP17L4A6NCW7 530 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 ECE1P42892 770 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 MMP14P50281 582 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
SUPT6H-204ENST00000577939 RASSF10A6NK89 507 aa12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 DCPSQ96C86 337 aaKnown RBP12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 HDAC5Q9UQL6 1122 aa12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
SUPT6H-204ENST00000577939 HSPA1AP0DMV8 641 aaKnown RBP12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 HSPA1BP0DMV9 641 aaKnown RBP12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 CHRNDQ07001 517 aa12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 TBC1D10BQ4KMP7 808 aaPredicted RBP12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 ZNF804AQ7Z570 1209 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1100.7 ms