RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TRIM28Q13263 835 aaKnown RBP20.6■□□□□ 0.89
VAPA-204ENST00000577901 DPF2Q92785 391 aa20.6■□□□□ 0.89
VAPA-204ENST00000577901 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
VAPA-204ENST00000577901 TSKSQ9UJT2 592 aa20.6■□□□□ 0.89
VAPA-204ENST00000577901 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
VAPA-204ENST00000577901 SAMD7Q7Z3H4 446 aa20.59■□□□□ 0.89
VAPA-204ENST00000577901 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
VAPA-204ENST00000577901 COL4A1P02462 1669 aa20.58■□□□□ 0.89
VAPA-204ENST00000577901 DOK7Q18PE1 504 aa20.58■□□□□ 0.89
VAPA-204ENST00000577901 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.89
VAPA-204ENST00000577901 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.89
VAPA-204ENST00000577901 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
VAPA-204ENST00000577901 EYA3Q99504 573 aa20.58■□□□□ 0.89
VAPA-204ENST00000577901 CA12O43570 354 aa20.57■□□□□ 0.88
VAPA-204ENST00000577901 ECE2O60344 883 aa20.57■□□□□ 0.88
VAPA-204ENST00000577901 BRPF1P55201 1214 aaPredicted RBP20.57■□□□□ 0.88
VAPA-204ENST00000577901 RPS8P62241 208 aaKnown RBP20.57■□□□□ 0.88
VAPA-204ENST00000577901 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
VAPA-204ENST00000577901 TBC1D10BQ4KMP7 808 aaPredicted RBP20.57■□□□□ 0.88
VAPA-204ENST00000577901 TBC1D16Q8TBP0 767 aa20.57■□□□□ 0.88
VAPA-204ENST00000577901 RPS12P25398 132 aaKnown RBP20.56■□□□□ 0.88
VAPA-204ENST00000577901 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
VAPA-204ENST00000577901 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
VAPA-204ENST00000577901 EGFRP00533 1210 aa20.55■□□□□ 0.88
VAPA-204ENST00000577901 DLK2Q6UY11 383 aa20.55■□□□□ 0.88
VAPA-204ENST00000577901 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
VAPA-204ENST00000577901 RTL9Q8NET4 1388 aa20.55■□□□□ 0.88
VAPA-204ENST00000577901 HSP90B1P14625 803 aaKnown RBP20.54■□□□□ 0.88
VAPA-204ENST00000577901 HUNKP57058 714 aa20.54■□□□□ 0.88
VAPA-204ENST00000577901 CCDC30Q5VVM6 783 aa20.54■□□□□ 0.88
VAPA-204ENST00000577901 KRT26Q7Z3Y9 468 aa20.54■□□□□ 0.88
VAPA-204ENST00000577901 ZC3H12CQ9C0D7 883 aaKnown RBP20.54■□□□□ 0.88
VAPA-204ENST00000577901 SEC31BQ9NQW1 1179 aa20.54■□□□□ 0.88
VAPA-204ENST00000577901 NOGQ13253 232 aa20.53■□□□□ 0.88
VAPA-204ENST00000577901 RBM26Q5T8P6 1007 aaKnown RBP20.53■□□□□ 0.88
VAPA-204ENST00000577901 MIER1Q8N108 512 aa20.53■□□□□ 0.88
VAPA-204ENST00000577901 MYD88Q99836 296 aa20.53■□□□□ 0.88
VAPA-204ENST00000577901 MYH16Q9H6N6 1097 aa20.53■□□□□ 0.88
VAPA-204ENST00000577901 PODXL2Q9NZ53 605 aa20.53■□□□□ 0.88
VAPA-204ENST00000577901 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
VAPA-204ENST00000577901 TWISTNBQ3B726 338 aaPredicted RBP20.52■□□□□ 0.88
VAPA-204ENST00000577901 TSPYL6Q8N831 410 aa20.52■□□□□ 0.88
VAPA-204ENST00000577901 DCPSQ96C86 337 aaKnown RBP20.52■□□□□ 0.88
VAPA-204ENST00000577901 ANKIB1Q9P2G1 1089 aa20.52■□□□□ 0.88
VAPA-204ENST00000577901 FANCIQ9NVI1 1328 aa20.52■□□□□ 0.87
VAPA-204ENST00000577901 ADM5C9JUS6 153 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 G3V3G9 751 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 UFL1O94874 794 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 VIL1P09327 827 aaKnown RBP20.51■□□□□ 0.87
VAPA-204ENST00000577901 CCDC152Q4G0S7 254 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 DCAF8Q5TAQ9 597 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 CCDC191Q8NCU4 936 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 GGA1Q9UJY5 639 aa20.51■□□□□ 0.87
VAPA-204ENST00000577901 PDE8AO60658 829 aa20.5■□□□□ 0.87
VAPA-204ENST00000577901 PCCAP05165 728 aaPredicted RBP20.5■□□□□ 0.87
VAPA-204ENST00000577901 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
VAPA-204ENST00000577901 C2orf69Q8N8R5 385 aa20.5■□□□□ 0.87
VAPA-204ENST00000577901 ZIC5Q96T25 663 aa20.5■□□□□ 0.87
VAPA-204ENST00000577901 GBA2Q9HCG7 927 aaPredicted RBP20.5■□□□□ 0.87
VAPA-204ENST00000577901 CWC25Q9NXE8 425 aaPredicted RBP20.5■□□□□ 0.87
VAPA-204ENST00000577901 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
VAPA-204ENST00000577901 RGMBQ6NW40 437 aa20.49■□□□□ 0.87
VAPA-204ENST00000577901 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
VAPA-204ENST00000577901 STK31Q9BXU1 1019 aa20.49■□□□□ 0.87
VAPA-204ENST00000577901 FAM155AB1AL88 458 aaPredicted RBP20.48■□□□□ 0.87
VAPA-204ENST00000577901 CCDC85AQ96PX6 553 aaPredicted RBP20.48■□□□□ 0.87
VAPA-204ENST00000577901 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
VAPA-204ENST00000577901 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
VAPA-204ENST00000577901 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
VAPA-204ENST00000577901 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
VAPA-204ENST00000577901 SULF1Q8IWU6 871 aa20.47■□□□□ 0.87
VAPA-204ENST00000577901 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
VAPA-204ENST00000577901 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
VAPA-204ENST00000577901 MCOLN1Q9GZU1 580 aa20.47■□□□□ 0.87
VAPA-204ENST00000577901 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
VAPA-204ENST00000577901 ZNF157P51786 506 aaPredicted RBP20.46■□□□□ 0.87
VAPA-204ENST00000577901 RSBN1LQ6PCB5 846 aaPredicted RBP20.46■□□□□ 0.87
VAPA-204ENST00000577901 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
VAPA-204ENST00000577901 ASTN2O75129 1339 aaPredicted RBP20.46■□□□□ 0.87
VAPA-204ENST00000577901 SCN9AQ15858 1988 aa20.45■□□□□ 0.86
VAPA-204ENST00000577901 ZNF280AP59817 542 aaPredicted RBP20.45■□□□□ 0.86
VAPA-204ENST00000577901 AGBL3Q8NEM8 1001 aa20.45■□□□□ 0.86
VAPA-204ENST00000577901 XDHP47989 1333 aa20.45■□□□□ 0.86
VAPA-204ENST00000577901 ZNF609O15014 1411 aa20.44■□□□□ 0.86
VAPA-204ENST00000577901 VAMP4O75379 141 aa20.44■□□□□ 0.86
VAPA-204ENST00000577901 RGS19P49795 217 aa20.44■□□□□ 0.86
VAPA-204ENST00000577901 KIF23Q02241 960 aaPredicted RBP20.44■□□□□ 0.86
VAPA-204ENST00000577901 DGKZQ13574 1117 aa20.44■□□□□ 0.86
VAPA-204ENST00000577901 CDCA5Q96FF9 252 aa20.44■□□□□ 0.86
VAPA-204ENST00000577901 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
VAPA-204ENST00000577901 E9PSI1 815 aa20.43■□□□□ 0.86
VAPA-204ENST00000577901 SLC4A2P04920 1241 aa20.43■□□□□ 0.86
VAPA-204ENST00000577901 ATP2B4P23634 1241 aa20.43■□□□□ 0.86
VAPA-204ENST00000577901 MLLT1Q03111 559 aaPredicted RBP20.43■□□□□ 0.86
VAPA-204ENST00000577901 SCARF1Q14162 830 aa20.43■□□□□ 0.86
VAPA-204ENST00000577901 CTSWP56202 376 aa20.42■□□□□ 0.86
VAPA-204ENST00000577901 ANGEL2Q5VTE6 544 aaKnown RBP20.42■□□□□ 0.86
VAPA-204ENST00000577901 CDC5LQ99459 802 aaKnown RBP20.42■□□□□ 0.86
VAPA-204ENST00000577901 SAGE1Q9NXZ1 904 aa20.42■□□□□ 0.86
VAPA-204ENST00000577901 POLR2AP24928 1970 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms