RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
CDKN2A-211ENST00000577854 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 PLIN1O60240 522 aa11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 NBPF7P0C2Y1 421 aaPredicted RBP11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 CIAPIN1Q6FI81 312 aa11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 CNNM1Q9NRU3 951 aa11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
CDKN2A-211ENST00000577854 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 ECE2O60344 883 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 BCAR3O75815 825 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 ATP2B4P23634 1241 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 CCT4P50991 539 aaKnown RBP11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 FOXO4P98177 505 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 TNIP1Q15025 636 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 CLUAP1Q96AJ1 413 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 COL4A1P02462 1669 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 TAF1P21675 1872 aa11.61□□□□□ -0.55
CDKN2A-211ENST00000577854 CACNA1FO60840 1977 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 COL4A5P29400 1685 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 CSF1RP07333 972 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 UBTFL1P0CB47 393 aaPredicted RBP11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 EPHX2P34913 555 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 CXCL9Q07325 125 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 LDHAL6AQ6ZMR3 332 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 ANKRD2Q9GZV1 360 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 TAF1DQ9H5J8 278 aaPredicted RBP11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 BICC1Q9H694 974 aaKnown RBP11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
CDKN2A-211ENST00000577854 POTECB2RU33 542 aa11.59□□□□□ -0.55
CDKN2A-211ENST00000577854 HSPA6P17066 643 aa11.59□□□□□ -0.55
CDKN2A-211ENST00000577854 GMPSP49915 693 aaPredicted RBP11.59□□□□□ -0.55
CDKN2A-211ENST00000577854 CHRNDQ07001 517 aa11.59□□□□□ -0.55
CDKN2A-211ENST00000577854 FSTL1Q12841 308 aa11.59□□□□□ -0.55
CDKN2A-211ENST00000577854 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
CDKN2A-211ENST00000577854 YDJCA8MPS7 323 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 PSMD14O00487 310 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 TAF5LO75529 589 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 EPS15P42566 896 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 PNMA8AQ86V59 439 aaPredicted RBP11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 USP44Q9H0E7 712 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 ZNF804BA4D1E1 1349 aa11.58□□□□□ -0.56
CDKN2A-211ENST00000577854 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 SCNN1DP51172 638 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 WDR90Q96KV7 1748 aa11.57□□□□□ -0.56
CDKN2A-211ENST00000577854 WTIPA6NIX2 430 aaPredicted RBP11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 H7C1D1 291 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 TRIM27P14373 513 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 APLP1P51693 650 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 METTL24Q5JXM2 366 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 ARHGAP45Q92619 1136 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 KCNQ5Q9NR82 932 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 UTYO14607 1347 aa11.56□□□□□ -0.56
CDKN2A-211ENST00000577854 MED23Q9ULK4 1368 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 MYH3P11055 1940 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 SNAP23O00161 211 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 GNAI3P08754 354 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 MEIS3Q99687 375 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 SIL1Q9H173 461 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 ADARB2Q9NS39 739 aaKnown RBP11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 CNOT7Q9UIV1 285 aaKnown RBP11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 SPEF2Q9C093 1822 aa11.55□□□□□ -0.56
CDKN2A-211ENST00000577854 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 KLRK1P26718 216 aa11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 HTRA3P83110 453 aa11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 USP50Q70EL3 339 aaPredicted RBP11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 ZNF804AQ7Z570 1209 aa11.54□□□□□ -0.56
CDKN2A-211ENST00000577854 VPS37DQ86XT2 251 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms