RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 XDHP47989 1333 aa24.34■■□□□ 1.49
SS18-208ENST00000577751 WASHC4Q2M389 1173 aa24.33■■□□□ 1.49
SS18-208ENST00000577751 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
SS18-208ENST00000577751 BICC1Q9H694 974 aaKnown RBP24.33■■□□□ 1.49
SS18-208ENST00000577751 ANKIB1Q9P2G1 1089 aa24.33■■□□□ 1.49
SS18-208ENST00000577751 CHMP3Q9Y3E7 222 aa24.33■■□□□ 1.49
SS18-208ENST00000577751 C6orf229H3BNL8 230 aa24.32■■□□□ 1.48
SS18-208ENST00000577751 CCDC57Q2TAC2 916 aa24.32■■□□□ 1.48
SS18-208ENST00000577751 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
SS18-208ENST00000577751 MPHOSPH8Q99549 860 aa24.32■■□□□ 1.48
SS18-208ENST00000577751 GGA1Q9UJY5 639 aa24.32■■□□□ 1.48
SS18-208ENST00000577751 TNNQ9UQP3 1299 aa24.32■■□□□ 1.48
SS18-208ENST00000577751 VEGFAP15692 232 aaPredicted RBP24.31■■□□□ 1.48
SS18-208ENST00000577751 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
SS18-208ENST00000577751 ZKSCAN2Q63HK3 967 aa24.31■■□□□ 1.48
SS18-208ENST00000577751 L3MBTL3Q96JM7 780 aaPredicted RBP24.31■■□□□ 1.48
SS18-208ENST00000577751 EYA3Q99504 573 aa24.31■■□□□ 1.48
SS18-208ENST00000577751 ZNRF3Q9ULT6 936 aa24.31■■□□□ 1.48
SS18-208ENST00000577751 ATP2B4P23634 1241 aa24.3■■□□□ 1.48
SS18-208ENST00000577751 GPC2Q8N158 579 aa24.3■■□□□ 1.48
SS18-208ENST00000577751 UFL1O94874 794 aa24.29■■□□□ 1.48
SS18-208ENST00000577751 SCN4AP35499 1836 aa24.28■■□□□ 1.48
SS18-208ENST00000577751 RIMBP2O15034 1052 aa24.28■■□□□ 1.48
SS18-208ENST00000577751 UBTFL1P0CB47 393 aaPredicted RBP24.28■■□□□ 1.48
SS18-208ENST00000577751 C1QTNF8P60827 252 aa24.28■■□□□ 1.48
SS18-208ENST00000577751 ZNF594Q96JF6 807 aaPredicted RBP24.28■■□□□ 1.48
SS18-208ENST00000577751 GPR101Q96P66 508 aaPredicted RBP24.28■■□□□ 1.48
SS18-208ENST00000577751 ZC3H12CQ9C0D7 883 aaKnown RBP24.28■■□□□ 1.48
SS18-208ENST00000577751 A0A1B0GUL6 1792 aa24.28■■□□□ 1.48
SS18-208ENST00000577751 WTIPA6NIX2 430 aaPredicted RBP24.27■■□□□ 1.48
SS18-208ENST00000577751 TOMM70O94826 608 aa24.27■■□□□ 1.48
SS18-208ENST00000577751 CLUAP1Q96AJ1 413 aa24.27■■□□□ 1.48
SS18-208ENST00000577751 MEIS3Q99687 375 aa24.27■■□□□ 1.48
SS18-208ENST00000577751 ANKRD2Q9GZV1 360 aa24.27■■□□□ 1.48
SS18-208ENST00000577751 YDJCA8MPS7 323 aa24.26■■□□□ 1.47
SS18-208ENST00000577751 CHRNDQ07001 517 aa24.26■■□□□ 1.47
SS18-208ENST00000577751 CXCL9Q07325 125 aa24.26■■□□□ 1.47
SS18-208ENST00000577751 LDHAL6AQ6ZMR3 332 aa24.26■■□□□ 1.47
SS18-208ENST00000577751 LEMD3Q9Y2U8 911 aa24.26■■□□□ 1.47
SS18-208ENST00000577751 TAF7LQ5H9L4 462 aa24.25■■□□□ 1.47
SS18-208ENST00000577751 DBNDD1Q9H9R9 158 aa24.25■■□□□ 1.47
SS18-208ENST00000577751 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
SS18-208ENST00000577751 MED23Q9ULK4 1368 aa24.24■■□□□ 1.47
SS18-208ENST00000577751 IQCA1LA6NCM1 817 aa24.23■■□□□ 1.47
SS18-208ENST00000577751 GNAI3P08754 354 aa24.23■■□□□ 1.47
SS18-208ENST00000577751 DOK7Q18PE1 504 aa24.23■■□□□ 1.47
SS18-208ENST00000577751 C16orf71Q8IYS4 520 aaPredicted RBP24.23■■□□□ 1.47
SS18-208ENST00000577751 TMEM57Q8N5G2 664 aa24.23■■□□□ 1.47
SS18-208ENST00000577751 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
SS18-208ENST00000577751 ZNF804BA4D1E1 1349 aa24.22■■□□□ 1.47
SS18-208ENST00000577751 ECE2O60344 883 aa24.22■■□□□ 1.47
SS18-208ENST00000577751 RFX5P48382 616 aaPredicted RBP24.22■■□□□ 1.47
SS18-208ENST00000577751 CIAPIN1Q6FI81 312 aa24.22■■□□□ 1.47
SS18-208ENST00000577751 DZIP1LQ8IYY4 767 aaKnown RBP24.22■■□□□ 1.47
SS18-208ENST00000577751 RBM46Q8TBY0 533 aaKnown RBP24.22■■□□□ 1.47
SS18-208ENST00000577751 CNNM1Q9NRU3 951 aa24.22■■□□□ 1.47
SS18-208ENST00000577751 RIPOR2Q9Y4F9 1068 aa24.22■■□□□ 1.47
SS18-208ENST00000577751 LRRFIP2Q9Y608 721 aaKnown RBP24.22■■□□□ 1.47
SS18-208ENST00000577751 RAD17O75943 681 aa24.21■■□□□ 1.47
SS18-208ENST00000577751 TNIP1Q15025 636 aa24.21■■□□□ 1.47
SS18-208ENST00000577751 PUS3Q9BZE2 481 aaKnown RBP24.21■■□□□ 1.47
SS18-208ENST00000577751 RCAN3Q9UKA8 241 aa24.21■■□□□ 1.47
SS18-208ENST00000577751 SCN9AQ15858 1988 aa24.21■■□□□ 1.47
SS18-208ENST00000577751 TAF5LO75529 589 aa24.2■■□□□ 1.46
SS18-208ENST00000577751 RLBP1P12271 317 aa24.2■■□□□ 1.46
SS18-208ENST00000577751 SCNN1DP51172 638 aa24.2■■□□□ 1.46
SS18-208ENST00000577751 HELBQ8NG08 1087 aaPredicted RBP24.2■■□□□ 1.46
SS18-208ENST00000577751 TAF1DQ9H5J8 278 aaPredicted RBP24.2■■□□□ 1.46
SS18-208ENST00000577751 HACL1Q9UJ83 578 aa24.2■■□□□ 1.46
SS18-208ENST00000577751 PSME4Q14997 1843 aa24.19■■□□□ 1.46
SS18-208ENST00000577751 IRS2Q9Y4H2 1338 aa24.19■■□□□ 1.46
SS18-208ENST00000577751 TXNRD3Q86VQ6 643 aa24.19■■□□□ 1.46
SS18-208ENST00000577751 KCNQ5Q9NR82 932 aa24.19■■□□□ 1.46
SS18-208ENST00000577751 PTPN12Q05209 780 aaKnown RBP24.18■■□□□ 1.46
SS18-208ENST00000577751 C15orf52Q6ZUT6 534 aaKnown RBP24.18■■□□□ 1.46
SS18-208ENST00000577751 PODNQ7Z5L7 613 aa24.18■■□□□ 1.46
SS18-208ENST00000577751 FTSJ3Q8IY81 847 aaKnown RBP24.18■■□□□ 1.46
SS18-208ENST00000577751 KLHDC4Q8TBB5 520 aa24.18■■□□□ 1.46
SS18-208ENST00000577751 MROH5Q6ZUA9 1318 aa24.17■■□□□ 1.46
SS18-208ENST00000577751 G3V3G9 751 aa24.17■■□□□ 1.46
SS18-208ENST00000577751 SNAP23O00161 211 aa24.17■■□□□ 1.46
SS18-208ENST00000577751 LRRC24Q50LG9 513 aa24.17■■□□□ 1.46
SS18-208ENST00000577751 DCAF8Q5TAQ9 597 aa24.17■■□□□ 1.46
SS18-208ENST00000577751 PSMD14O00487 310 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 KLRK1P26718 216 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 EPHX2P34913 555 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 KCNJ4P48050 445 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 FSTL1Q12841 308 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 MTX1Q13505 466 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 COA1Q9GZY4 146 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 GPRC5DQ9NZD1 345 aa24.16■■□□□ 1.46
SS18-208ENST00000577751 PLIN1O60240 522 aa24.15■■□□□ 1.46
SS18-208ENST00000577751 GNAI2P04899 355 aa24.15■■□□□ 1.46
SS18-208ENST00000577751 LMOD1P29536 600 aaPredicted RBP24.15■■□□□ 1.46
SS18-208ENST00000577751 EPS15P42566 896 aa24.15■■□□□ 1.46
SS18-208ENST00000577751 GMPSP49915 693 aaPredicted RBP24.15■■□□□ 1.46
SS18-208ENST00000577751 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
SS18-208ENST00000577751 ADAMTSL1Q8N6G6 1762 aa24.15■■□□□ 1.46
SS18-208ENST00000577751 EYA2O00167 538 aa24.14■■□□□ 1.45
SS18-208ENST00000577751 ZBTB7BO15156 539 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms