RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
CRLF3-202ENST00000577725 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
CRLF3-202ENST00000577725 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
CRLF3-202ENST00000577725 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
CRLF3-202ENST00000577725 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
CRLF3-202ENST00000577725 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 GNAI2P04899 355 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 GNAI3P08754 354 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
CRLF3-202ENST00000577725 UBTFL1P0CB47 393 aaPredicted RBP12.58□□□□□ -0.4
CRLF3-202ENST00000577725 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
CRLF3-202ENST00000577725 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 HLFQ16534 295 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 CEP85Q6P2H3 762 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
CRLF3-202ENST00000577725 MAP3K15Q6ZN16 1313 aa12.58□□□□□ -0.4
CRLF3-202ENST00000577725 COL15A1P39059 1388 aa12.57□□□□□ -0.4
CRLF3-202ENST00000577725 TRPA1O75762 1119 aa12.57□□□□□ -0.4
CRLF3-202ENST00000577725 EIF5P55010 431 aaKnown RBP12.57□□□□□ -0.4
CRLF3-202ENST00000577725 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
CRLF3-202ENST00000577725 ANKRD44Q8N8A2 993 aa12.57□□□□□ -0.4
CRLF3-202ENST00000577725 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
CRLF3-202ENST00000577725 NUP98P52948 1817 aa12.57□□□□□ -0.4
CRLF3-202ENST00000577725 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
CRLF3-202ENST00000577725 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
CRLF3-202ENST00000577725 EPS15P42566 896 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 GCKRQ14397 625 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 MASTLQ96GX5 879 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 SUCLG2Q96I99 432 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 RNF186Q9NXI6 227 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 ANKRD36CQ5JPF3 1778 aa12.56□□□□□ -0.4
CRLF3-202ENST00000577725 SZT2Q5T011 3432 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 COL11A2P13942 1736 aaPredicted RBP12.55□□□□□ -0.4
CRLF3-202ENST00000577725 GRM8O00222 908 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 SRGNP10124 158 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 GPTP24298 496 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 IARSP41252 1262 aaKnown RBP12.55□□□□□ -0.4
CRLF3-202ENST00000577725 SCNN1DP51172 638 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 PRR5LQ6MZQ0 368 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
CRLF3-202ENST00000577725 COLQQ9Y215 455 aaPredicted RBP12.55□□□□□ -0.4
CRLF3-202ENST00000577725 GJA3Q9Y6H8 435 aa12.55□□□□□ -0.4
CRLF3-202ENST00000577725 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
CRLF3-202ENST00000577725 TCIRG1Q13488 830 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
CRLF3-202ENST00000577725 RTKN2Q8IZC4 609 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 JDP2Q8WYK2 163 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 ISCA1Q9BUE6 129 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 ZNF408Q9H9D4 720 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
CRLF3-202ENST00000577725 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
CRLF3-202ENST00000577725 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 A0A087WZG4 1122 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 EPHA10Q5JZY3 1008 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
CRLF3-202ENST00000577725 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
CRLF3-202ENST00000577725 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
CRLF3-202ENST00000577725 RGS3P49796 1198 aa12.52□□□□□ -0.41
CRLF3-202ENST00000577725 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
CRLF3-202ENST00000577725 HUNKP57058 714 aa12.52□□□□□ -0.41
CRLF3-202ENST00000577725 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
CRLF3-202ENST00000577725 KAZALD1Q96I82 304 aa12.52□□□□□ -0.41
CRLF3-202ENST00000577725 SLX4Q8IY92 1834 aa12.52□□□□□ -0.41
CRLF3-202ENST00000577725 UTYO14607 1347 aa12.52□□□□□ -0.41
CRLF3-202ENST00000577725 MKI67P46013 3256 aaKnown RBP12.52□□□□□ -0.41
CRLF3-202ENST00000577725 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 A0A0C4DFX4 3053 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 FAM177BA6PVY3 158 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
CRLF3-202ENST00000577725 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 APBB1O00213 710 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 NPHP1O15259 732 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 CASP7P55210 303 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 KIF23Q02241 960 aaPredicted RBP12.51□□□□□ -0.41
CRLF3-202ENST00000577725 TBC1D9BQ66K14 1250 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
CRLF3-202ENST00000577725 BCL11AQ9H165 835 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
CRLF3-202ENST00000577725 HDAC9Q9UKV0 1011 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 UBN2Q6ZU65 1347 aa12.51□□□□□ -0.41
CRLF3-202ENST00000577725 H7C1W4 665 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 HMMRO75330 724 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 ST5P78524 1137 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 RGMBQ6NW40 437 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
CRLF3-202ENST00000577725 ADARB2Q9NS39 739 aaKnown RBP12.5□□□□□ -0.41
CRLF3-202ENST00000577725 SRGAP3O43295 1099 aa12.49□□□□□ -0.41
CRLF3-202ENST00000577725 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms