RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PRC1O43663 620 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 SYCP1Q15431 976 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
RNF43-203ENST00000577716 USP19O94966 1318 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 KRT222Q8N1A0 295 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
RNF43-203ENST00000577716 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
RNF43-203ENST00000577716 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.45e-8■■■■□ 25.1
RNF43-203ENST00000577716 TFCP2Q12800 502 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
RNF43-203ENST00000577716 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 ERLIN2O94905 339 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 YEATS4O95619 227 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
RNF43-203ENST00000577716 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 FKBP15Q5T1M5 1219 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 SLC9C2Q5TAH2 1124 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 AOX1Q06278 1338 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 PRDM15P57071 1507 aaPredicted RBP12.54□□□□□ -0.4
RNF43-203ENST00000577716 RDXP35241 583 aaKnown RBP12.54□□□□□ -0.4
RNF43-203ENST00000577716 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
RNF43-203ENST00000577716 ANTXR1Q9H6X2 564 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 N4BP3O15049 544 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
RNF43-203ENST00000577716 HSPA4P34932 840 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
RNF43-203ENST00000577716 WTAPQ15007 396 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 KDM5AP29375 1690 aaKnown RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 UBA7P41226 1012 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 DZIP1Q86YF9 867 aaKnown RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 TAF4BQ92750 862 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 SLC27A2O14975 620 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 GCP02774 474 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 CACNA2D4Q7Z3S7 1137 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 CHD1O14646 1710 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 KCNA6P17658 529 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 IP6K1Q92551 441 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 ZNF287Q9HBT7 754 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 IFNKQ9P0W0 207 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
RNF43-203ENST00000577716 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
RNF43-203ENST00000577716 ADCY10Q96PN6 1610 aa12.52□□□□□ -0.4
RNF43-203ENST00000577716 AFMP43652 599 aa12.52□□□□□ -0.4
RNF43-203ENST00000577716 BABAM1Q9NWV8 329 aa12.52□□□□□ -0.4
RNF43-203ENST00000577716 KIAA0232Q92628 1395 aa12.52□□□□□ -0.41
RNF43-203ENST00000577716 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
RNF43-203ENST00000577716 CD2BP2O95400 341 aaKnown RBP12.52□□□□□ -0.41
RNF43-203ENST00000577716 ZNF444Q8N0Y2 327 aaPredicted RBP12.52□□□□□ -0.41
RNF43-203ENST00000577716 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
RNF43-203ENST00000577716 A0A1B0GVL5 298 aa12.52□□□□□ -0.41
RNF43-203ENST00000577716 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.41
RNF43-203ENST00000577716 TIMM10P62072 90 aa12.52□□□□□ -0.41
RNF43-203ENST00000577716 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
RNF43-203ENST00000577716 SBNO1A3KN83 1393 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 HOXB7P09629 217 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 DNA2P51530 1060 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 CCDC94Q9BW85 323 aaPredicted RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 FSD2A1L4K1 749 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 PAFAH1B1P43034 410 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 RTN1Q16799 776 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 ZSCAN29Q8IWY8 852 aaPredicted RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 ZCCHC11Q5TAX3 1644 aaKnown RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 TSPY2A6NKD2 308 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 IGSF3O75054 1194 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 PPP1R9BQ96SB3 815 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 SEPT11Q9NVA2 429 aaKnown RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 IDEP14735 1019 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 ARFGAP3Q9NP61 516 aa12.51□□□□□ -0.41
RNF43-203ENST00000577716 IQSEC3Q9UPP2 1182 aaPredicted RBP12.51□□□□□ -0.41
RNF43-203ENST00000577716 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 KRT23Q9C075 422 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 MYOM2P54296 1465 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 NEO1Q92859 1461 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 MCM3P25205 808 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
RNF43-203ENST00000577716 LEO1Q8WVC0 666 aaPredicted RBP12.5□□□□□ -0.41
RNF43-203ENST00000577716 SYNMO15061 1565 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms