RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 LRIT3Q3SXY7 679 aa9.84□□□□□ -0.83
RAB40B-210ENST00000576148 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
RAB40B-210ENST00000576148 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 ZNF280AP59817 542 aaPredicted RBP9.83□□□□□ -0.84
RAB40B-210ENST00000576148 CAP1Q01518 475 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 UBE2Q1Q7Z7E8 422 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 SLC10A4Q96EP9 437 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 KCNQ5Q9NR82 932 aa9.83□□□□□ -0.84
RAB40B-210ENST00000576148 SCAF8Q9UPN6 1271 aaKnown RBP9.83□□□□□ -0.84
RAB40B-210ENST00000576148 ABCC4O15439 1325 aa9.82□□□□□ -0.84
RAB40B-210ENST00000576148 ECE2O60344 883 aa9.82□□□□□ -0.84
RAB40B-210ENST00000576148 VIL1P09327 827 aaKnown RBP9.82□□□□□ -0.84
RAB40B-210ENST00000576148 ZBTB48P10074 688 aaPredicted RBP9.82□□□□□ -0.84
RAB40B-210ENST00000576148 IL13P35225 146 aa9.82□□□□□ -0.84
RAB40B-210ENST00000576148 PRKG1Q13976 671 aa9.82□□□□□ -0.84
RAB40B-210ENST00000576148 SUSD4Q5VX71 490 aa9.82□□□□□ -0.84
RAB40B-210ENST00000576148 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.82□□□□□ -0.84
RAB40B-210ENST00000576148 TTC28Q96AY4 2481 aa9.82□□□□□ -0.84
RAB40B-210ENST00000576148 RTL9Q8NET4 1388 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 IBTKQ9P2D0 1353 aaPredicted RBP9.81□□□□□ -0.84
RAB40B-210ENST00000576148 NBPF26B4DH59 902 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 ERVV-1B6SEH8 477 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 SNRPA1P09661 255 aaKnown RBP9.81□□□□□ -0.84
RAB40B-210ENST00000576148 GPTP24298 496 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 GJA8P48165 433 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 BCAMP50895 628 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 DOK7Q18PE1 504 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 NBPF10Q6P3W6 841 aaKnown RBP9.81□□□□□ -0.84
RAB40B-210ENST00000576148 GDF15Q99988 308 aa9.81□□□□□ -0.84
RAB40B-210ENST00000576148 TMEM265A0A087WTH1 108 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 BTBD11A6QL63 1104 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 KCNQ3O43525 872 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 FARP2O94887 1054 aaPredicted RBP9.8□□□□□ -0.84
RAB40B-210ENST00000576148 GJB1P08034 283 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 HMOX1P09601 288 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 MTFR1Q15390 333 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
RAB40B-210ENST00000576148 PPP1R42Q7Z4L9 355 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 AGBL3Q8NEM8 1001 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 MYOZ2Q9NPC6 264 aa9.8□□□□□ -0.84
RAB40B-210ENST00000576148 ANGEL1Q9UNK9 670 aaKnown RBP9.8□□□□□ -0.84
RAB40B-210ENST00000576148 G3V3G9 751 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 NTSR2O95665 410 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 MAP3K12Q12852 859 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 KIF22Q14807 665 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 SLC10A5Q5PT55 438 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 TMC4Q7Z404 712 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 TDHQ8IZJ6 230 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 SNX27Q96L92 541 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 EYA3Q99504 573 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 NSFL1CQ9UNZ2 370 aaKnown RBP9.79□□□□□ -0.84
RAB40B-210ENST00000576148 IRS2Q9Y4H2 1338 aa9.79□□□□□ -0.84
RAB40B-210ENST00000576148 GNAT3A8MTJ3 354 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 PRMT2P55345 433 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 GRAPQ13588 217 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 FAM109BQ6ICB4 259 aaPredicted RBP9.78□□□□□ -0.84
RAB40B-210ENST00000576148 RSBN1LQ6PCB5 846 aaPredicted RBP9.78□□□□□ -0.84
RAB40B-210ENST00000576148 KIF6Q6ZMV9 814 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 NGEFQ8N5V2 710 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 GRAPLQ8TC17 118 aaPredicted RBP9.78□□□□□ -0.84
RAB40B-210ENST00000576148 GUCD1Q96NT3 240 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 UBN2Q6ZU65 1347 aa9.78□□□□□ -0.84
RAB40B-210ENST00000576148 GNRH1P01148 92 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 CCL5P13501 91 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 MAFAQ8NHW3 353 aaPredicted RBP9.77□□□□□ -0.85
RAB40B-210ENST00000576148 PTPN18Q99952 460 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 RNF208Q9H0X6 261 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 KDM3BQ7LBC6 1761 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 MAP3K15Q6ZN16 1313 aa9.77□□□□□ -0.85
RAB40B-210ENST00000576148 NBPF9Q3BBW0 867 aa9.76□□□□□ -0.85
RAB40B-210ENST00000576148 PARP10Q53GL7 1025 aa9.76□□□□□ -0.85
RAB40B-210ENST00000576148 ZNF34Q8IZ26 560 aa9.76□□□□□ -0.85
RAB40B-210ENST00000576148 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
RAB40B-210ENST00000576148 ZC3H12CQ9C0D7 883 aaKnown RBP9.76□□□□□ -0.85
RAB40B-210ENST00000576148 POLLQ9UGP5 575 aa9.76□□□□□ -0.85
RAB40B-210ENST00000576148 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
RAB40B-210ENST00000576148 WDHD1O75717 1129 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 TAF1CQ15572 869 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 U2AF1L4Q8WU68 220 aaKnown RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 CLMNQ96JQ2 1002 aa9.75□□□□□ -0.85
RAB40B-210ENST00000576148 UTP14AQ9BVJ6 771 aaKnown RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 BIN2Q9UBW5 565 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-210ENST00000576148 SYNGAP1Q96PV0 1343 aa9.75□□□□□ -0.85
RAB40B-210ENST00000576148 UNCXA6NJT0 531 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
RAB40B-210ENST00000576148 GRK4P32298 578 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 UBXN2AP68543 259 aa9.74□□□□□ -0.85
RAB40B-210ENST00000576148 LACTBP83111 547 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms