RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 EHD4Q9H223 541 aa9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 CUEDC1Q9NWM3 386 aaPredicted RBP9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 TLR7Q9NYK1 1049 aaKnown RBP9.85□□□□□ -0.83
TOM1L1-222ENST00000575909 POTECB2RU33 542 aa9.84□□□□□ -0.83
TOM1L1-222ENST00000575909 HOXD8P13378 290 aaPredicted RBP9.84□□□□□ -0.83
TOM1L1-222ENST00000575909 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
TOM1L1-222ENST00000575909 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
TOM1L1-222ENST00000575909 PHF24Q9UPV7 400 aa9.84□□□□□ -0.83
TOM1L1-222ENST00000575909 ITGA6P23229 1130 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 PLAURQ03405 335 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 HYAL2Q12891 473 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 FAM182BQ5T319 152 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 MEI1Q5TIA1 1274 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 PEAR1Q5VY43 1037 aaPredicted RBP9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 PRPF40BQ6NWY9 871 aaKnown RBP9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.83□□□□□ -0.84
TOM1L1-222ENST00000575909 KIF4AO95239 1232 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 NCAPG2Q86XI2 1143 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 ZNF654Q8IZM8 581 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 GLIS3Q8NEA6 775 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 SLC30A3Q99726 388 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 LATS2Q9NRM7 1088 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 GGT7Q9UJ14 662 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 HCN2Q9UL51 889 aa9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.82□□□□□ -0.84
TOM1L1-222ENST00000575909 XRCC5P13010 732 aaKnown RBP9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 CD33P20138 364 aa9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 GNL2Q13823 731 aaKnown RBP9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 GRIN2CQ14957 1233 aa9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 USP48Q86UV5 1035 aa9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 SLC43A3Q8NBI5 491 aa9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 BHMTQ93088 406 aa9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 GTPBP3Q969Y2 492 aaKnown RBP9.81□□□□□ -0.84
TOM1L1-222ENST00000575909 SHROOM4Q9ULL8 1493 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 FOXR1Q6PIV2 292 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 DHX32Q7L7V1 743 aaKnown RBP9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 TRERF1Q96PN7 1200 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 TINF2Q9BSI4 451 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 ACBD3Q9H3P7 528 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 PPM1HQ9ULR3 514 aa9.8□□□□□ -0.84
TOM1L1-222ENST00000575909 FGFR3P22607 806 aa9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 NRLP54845 237 aa9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 ZNF394Q53GI3 561 aa9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 ANKRD24Q8TF21 1146 aa9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 NOC4LQ9BVI4 516 aaKnown RBP9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 CAPN10Q9HC96 672 aa9.79□□□□□ -0.84
TOM1L1-222ENST00000575909 TMEM238LA0A1B0GVL6 79 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 FCGRTP55899 365 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 COL13A1Q5TAT6 717 aaPredicted RBP9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 RAB44Q7Z6P3 723 aaPredicted RBP9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 CCNJLQ8IV13 435 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 CEP120Q8N960 986 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 OSMRQ99650 979 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
TOM1L1-222ENST00000575909 RACK1P63244 317 aaKnown RBP9.77□□□□□ -0.85
TOM1L1-222ENST00000575909 DTHD1Q6ZMT9 781 aa9.77□□□□□ -0.85
TOM1L1-222ENST00000575909 ERMP1Q7Z2K6 904 aa9.77□□□□□ -0.85
TOM1L1-222ENST00000575909 UBXN4Q92575 508 aa9.77□□□□□ -0.85
TOM1L1-222ENST00000575909 TCF12Q99081 682 aa9.77□□□□□ -0.85
TOM1L1-222ENST00000575909 OXCT2Q9BYC2 517 aaPredicted RBP9.77□□□□□ -0.85
TOM1L1-222ENST00000575909 PCSK7Q16549 785 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 TRPM4Q8TD43 1214 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 CNTNAP3BQ96NU0 1288 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 CNTNAP3Q9BZ76 1288 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 DZANK1Q9NVP4 752 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 GMPR2Q9P2T1 348 aaKnown RBP9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 PRR12Q9ULL5 1215 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 PCDHGB7Q9Y5F8 929 aa9.76□□□□□ -0.85
TOM1L1-222ENST00000575909 GPLD1P80108 840 aa9.75□□□□□ -0.85
TOM1L1-222ENST00000575909 NSUN5Q96P11 429 aaKnown RBP9.75□□□□□ -0.85
TOM1L1-222ENST00000575909 AKAP2Q9Y2D5 859 aa9.75□□□□□ -0.85
TOM1L1-222ENST00000575909 INPP5FQ9Y2H2 1132 aa9.75□□□□□ -0.85
TOM1L1-222ENST00000575909 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 TNNI2P48788 182 aa9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 SIK1P57059 783 aa9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 CTBSQ01459 385 aa9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 PWP1Q13610 501 aa9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 TMEM102Q8N9M5 508 aaPredicted RBP9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 IRX2Q9BZI1 471 aaPredicted RBP9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 PPP1R1BQ9UD71 204 aaPredicted RBP9.74□□□□□ -0.85
TOM1L1-222ENST00000575909 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 RLBP1P12271 317 aa9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 SNRPBP14678 240 aaKnown RBP9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 CCDC85BQ15834 202 aaPredicted RBP9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 GMLQ99445 158 aa9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 TANGO6Q9C0B7 1094 aa9.73□□□□□ -0.85
TOM1L1-222ENST00000575909 BHLHE41Q9C0J9 482 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms