RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CENPBP07199 599 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-216ENST00000575599 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-216ENST00000575599 WDR90Q96KV7 1748 aa16.74■□□□□ 0.27
RPAIN-216ENST00000575599 C6orf229H3BNL8 230 aa16.74■□□□□ 0.27
RPAIN-216ENST00000575599 FZD9O00144 591 aa16.74■□□□□ 0.27
RPAIN-216ENST00000575599 ITGA6P23229 1130 aa16.74■□□□□ 0.27
RPAIN-216ENST00000575599 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
RPAIN-216ENST00000575599 LTBP1Q14766 1721 aa16.74■□□□□ 0.27
RPAIN-216ENST00000575599 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
RPAIN-216ENST00000575599 CSF1RP07333 972 aa16.73■□□□□ 0.27
RPAIN-216ENST00000575599 NBPF7P0C2Y1 421 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-216ENST00000575599 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
RPAIN-216ENST00000575599 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
RPAIN-216ENST00000575599 FOXO4P98177 505 aa16.73■□□□□ 0.27
RPAIN-216ENST00000575599 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
RPAIN-216ENST00000575599 UFL1O94874 794 aa16.72■□□□□ 0.27
RPAIN-216ENST00000575599 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-216ENST00000575599 BRPF1P55201 1214 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-216ENST00000575599 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
RPAIN-216ENST00000575599 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
RPAIN-216ENST00000575599 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
RPAIN-216ENST00000575599 GPR101Q96P66 508 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-216ENST00000575599 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
RPAIN-216ENST00000575599 VPS33BQ9H267 617 aa16.72■□□□□ 0.27
RPAIN-216ENST00000575599 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
RPAIN-216ENST00000575599 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 BCAR3O75815 825 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 TOMM70O94826 608 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 TBC1D16Q8TBP0 767 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 BSDC1Q9NW68 430 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-216ENST00000575599 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 GJA3Q9Y6H8 435 aa16.71■□□□□ 0.27
RPAIN-216ENST00000575599 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
RPAIN-216ENST00000575599 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-216ENST00000575599 EYA3Q99504 573 aa16.7■□□□□ 0.26
RPAIN-216ENST00000575599 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
RPAIN-216ENST00000575599 PLSCR2Q9NRY7 297 aa16.7■□□□□ 0.26
RPAIN-216ENST00000575599 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
RPAIN-216ENST00000575599 UTYO14607 1347 aa16.69■□□□□ 0.26
RPAIN-216ENST00000575599 XDHP47989 1333 aa16.69■□□□□ 0.26
RPAIN-216ENST00000575599 POTECB2RU33 542 aa16.69■□□□□ 0.26
RPAIN-216ENST00000575599 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
RPAIN-216ENST00000575599 GPC2Q8N158 579 aa16.69■□□□□ 0.26
RPAIN-216ENST00000575599 ZNRF3Q9ULT6 936 aa16.69■□□□□ 0.26
RPAIN-216ENST00000575599 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
RPAIN-216ENST00000575599 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
RPAIN-216ENST00000575599 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
RPAIN-216ENST00000575599 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
RPAIN-216ENST00000575599 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-216ENST00000575599 USP44Q9H0E7 712 aa16.68■□□□□ 0.26
RPAIN-216ENST00000575599 BICC1Q9H694 974 aaKnown RBP16.68■□□□□ 0.26
RPAIN-216ENST00000575599 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
RPAIN-216ENST00000575599 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
RPAIN-216ENST00000575599 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
RPAIN-216ENST00000575599 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
RPAIN-216ENST00000575599 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
RPAIN-216ENST00000575599 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-216ENST00000575599 ZC3H12CQ9C0D7 883 aaKnown RBP16.67■□□□□ 0.26
RPAIN-216ENST00000575599 SCN4AP35499 1836 aa16.67■□□□□ 0.26
RPAIN-216ENST00000575599 YDJCA8MPS7 323 aa16.66■□□□□ 0.26
RPAIN-216ENST00000575599 IPO8O15397 1037 aaKnown RBP16.66■□□□□ 0.26
RPAIN-216ENST00000575599 RAD17O75943 681 aa16.66■□□□□ 0.26
RPAIN-216ENST00000575599 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
RPAIN-216ENST00000575599 CXCL9Q07325 125 aa16.66■□□□□ 0.26
RPAIN-216ENST00000575599 HACL1Q9UJ83 578 aa16.66■□□□□ 0.26
RPAIN-216ENST00000575599 WTIPA6NIX2 430 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-216ENST00000575599 G3V3G9 751 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 ECE2O60344 883 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 TRIM27P14373 513 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
RPAIN-216ENST00000575599 GABBR2O75899 941 aa16.64■□□□□ 0.26
RPAIN-216ENST00000575599 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.26
RPAIN-216ENST00000575599 LMOD1P29536 600 aaPredicted RBP16.64■□□□□ 0.26
RPAIN-216ENST00000575599 CHRNDQ07001 517 aa16.64■□□□□ 0.26
RPAIN-216ENST00000575599 ANKRD44Q8N8A2 993 aa16.64■□□□□ 0.26
RPAIN-216ENST00000575599 SMC1BQ8NDV3 1235 aa16.64■□□□□ 0.26
RPAIN-216ENST00000575599 CLUAP1Q96AJ1 413 aa16.64■□□□□ 0.26
RPAIN-216ENST00000575599 ANKRD2Q9GZV1 360 aa16.64■□□□□ 0.26
RPAIN-216ENST00000575599 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.26
RPAIN-216ENST00000575599 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
RPAIN-216ENST00000575599 EPHX2P34913 555 aa16.64■□□□□ 0.25
RPAIN-216ENST00000575599 KCNJ4P48050 445 aa16.64■□□□□ 0.25
RPAIN-216ENST00000575599 SCNN1DP51172 638 aa16.64■□□□□ 0.25
RPAIN-216ENST00000575599 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-216ENST00000575599 EAPPQ56P03 285 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-216ENST00000575599 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
RPAIN-216ENST00000575599 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
RPAIN-216ENST00000575599 CNNM1Q9NRU3 951 aa16.64■□□□□ 0.25
RPAIN-216ENST00000575599 A0A1B0GUL6 1792 aa16.63■□□□□ 0.25
RPAIN-216ENST00000575599 MED23Q9ULK4 1368 aa16.63■□□□□ 0.25
RPAIN-216ENST00000575599 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
RPAIN-216ENST00000575599 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
RPAIN-216ENST00000575599 TNIP1Q15025 636 aa16.63■□□□□ 0.25
RPAIN-216ENST00000575599 HELBQ8NG08 1087 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-216ENST00000575599 MEIS3Q99687 375 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms