RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 METTL24Q5JXM2 366 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 CREB3L3Q68CJ9 461 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 BLOC1S2Q6QNY1 142 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 LDHAL6AQ6ZMR3 332 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 ZNF34Q8IZ26 560 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 JAKMIP1Q96N16 626 aaKnown RBP8.13□□□□□ -1.11
SMG6-217ENST00000575338 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
SMG6-217ENST00000575338 DBNDD2Q9BQY9 259 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 DSCC1Q9BVC3 393 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 UTP14AQ9BVJ6 771 aaKnown RBP8.13□□□□□ -1.11
SMG6-217ENST00000575338 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
SMG6-217ENST00000575338 CTNNA3Q9UI47 895 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 PALD1Q9ULE6 856 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 SBF2Q86WG5 1849 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 DOCK2Q92608 1830 aa8.13□□□□□ -1.11
SMG6-217ENST00000575338 LY75O60449 1722 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 RPAP1Q9BWH6 1393 aaPredicted RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 CNTNAP4Q9C0A0 1308 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 MYH13Q9UKX3 1938 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 BAG4O95429 457 aaKnown RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 MBD3O95983 291 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 ITGA6P23229 1130 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 CRKLP46109 303 aaKnown RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 PRPF40BQ6NWY9 871 aaKnown RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 MARCH10Q8NA82 808 aaPredicted RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 TTLL11Q8NHH1 800 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 JARID2Q92833 1246 aaPredicted RBP8.12□□□□□ -1.11
SMG6-217ENST00000575338 FAM89AQ96GI7 184 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 TTC14Q96N46 770 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 FOXD4L1Q9NU39 408 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 SMC3Q9UQE7 1217 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 KIF3AQ9Y496 699 aa8.12□□□□□ -1.11
SMG6-217ENST00000575338 CHD4Q14839 1912 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 AKAP11Q9UKA4 1901 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 A0A0D9SFI3 127 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 SLC27A2O14975 620 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 RNF113AO15541 343 aaKnown RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 TAF5LO75529 589 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 SLC5A1P13866 664 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 GPTP24298 496 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 IGHMBP2P38935 993 aaKnown RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 AK2P54819 239 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 HLFQ16534 295 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 KLHL40Q2TBA0 621 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 KLHL34Q8N239 644 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 SYAP1Q96A49 352 aaPredicted RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 FAM227BQ96M60 508 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 C8orf37Q96NL8 207 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 CDC5LQ99459 802 aaKnown RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 MPHOSPH8Q99549 860 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 UPF3BQ9BZI7 483 aaKnown RBP8.11□□□□□ -1.11
SMG6-217ENST00000575338 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
SMG6-217ENST00000575338 A0A1B0GUL6 1792 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 COL24A1Q17RW2 1714 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 GOLGA6L3A6NEY3 463 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 GOLIM4O00461 696 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 PDE8BO95263 885 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 BRD1O95696 1058 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 RPS6KB1P23443 525 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 TIMM10P62072 90 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 PTH1RQ03431 593 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 LRRC24Q50LG9 513 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 INTS5Q6P9B9 1019 aaKnown RBP8.1□□□□□ -1.11
SMG6-217ENST00000575338 LPIN2Q92539 896 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 ACSBG1Q96GR2 724 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 NEK1Q96PY6 1258 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 SLC4A9Q96Q91 983 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 USP21Q9UK80 565 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 TBC1D2BQ9UPU7 963 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 RIPOR2Q9Y4F9 1068 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 DDX49Q9Y6V7 483 aaKnown RBP8.1□□□□□ -1.11
SMG6-217ENST00000575338 BCL9LQ86UU0 1499 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 RIC1Q4ADV7 1423 aa8.1□□□□□ -1.11
SMG6-217ENST00000575338 IGSF3O75054 1194 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 PHF14O94880 888 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 FGD1P98174 961 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 IMMTQ16891 758 aaKnown RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 MEX3CQ5U5Q3 659 aaKnown RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 DDX46Q7L014 1031 aaKnown RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 RASEFQ8IZ41 740 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 APPBP2Q92624 585 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 ANP32BQ92688 251 aaKnown RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 ZNF594Q96JF6 807 aaPredicted RBP8.09□□□□□ -1.11
SMG6-217ENST00000575338 IL25Q9H293 177 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 GREM2Q9H772 168 aa8.09□□□□□ -1.11
SMG6-217ENST00000575338 NIP7Q9Y221 180 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG6-217ENST00000575338 ATRNO75882 1429 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms