RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
TVP23B-208ENST00000575261 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
TVP23B-208ENST00000575261 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
TVP23B-208ENST00000575261 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
TVP23B-208ENST00000575261 CA12O43570 354 aa13.48□□□□□ -0.25
TVP23B-208ENST00000575261 UFL1O94874 794 aa13.48□□□□□ -0.25
TVP23B-208ENST00000575261 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
TVP23B-208ENST00000575261 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
TVP23B-208ENST00000575261 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
TVP23B-208ENST00000575261 CCDC30Q5VVM6 783 aa13.48□□□□□ -0.25
TVP23B-208ENST00000575261 SAMD7Q7Z3H4 446 aa13.48□□□□□ -0.25
TVP23B-208ENST00000575261 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
TVP23B-208ENST00000575261 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
TVP23B-208ENST00000575261 SCN9AQ15858 1988 aa13.48□□□□□ -0.25
TVP23B-208ENST00000575261 ZNF609O15014 1411 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 PDE8AO60658 829 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 DOK7Q18PE1 504 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 KRT26Q7Z3Y9 468 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 USP48Q86UV5 1035 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 ABHD8Q96I13 439 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
TVP23B-208ENST00000575261 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 ANKIB1Q9P2G1 1089 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 GGA1Q9UJY5 639 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 PSME4Q14997 1843 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 MYH3P11055 1940 aa13.47□□□□□ -0.25
TVP23B-208ENST00000575261 G3V3G9 751 aa13.46□□□□□ -0.25
TVP23B-208ENST00000575261 EGFRP00533 1210 aa13.46□□□□□ -0.25
TVP23B-208ENST00000575261 HUNKP57058 714 aa13.46□□□□□ -0.25
TVP23B-208ENST00000575261 NOGQ13253 232 aa13.46□□□□□ -0.25
TVP23B-208ENST00000575261 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
TVP23B-208ENST00000575261 XDHP47989 1333 aa13.45□□□□□ -0.26
TVP23B-208ENST00000575261 VIL1P09327 827 aaKnown RBP13.45□□□□□ -0.26
TVP23B-208ENST00000575261 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
TVP23B-208ENST00000575261 DCPSQ96C86 337 aaKnown RBP13.45□□□□□ -0.26
TVP23B-208ENST00000575261 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
TVP23B-208ENST00000575261 KCNQ5Q9NR82 932 aa13.45□□□□□ -0.26
TVP23B-208ENST00000575261 TSKSQ9UJT2 592 aa13.45□□□□□ -0.26
TVP23B-208ENST00000575261 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
TVP23B-208ENST00000575261 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
TVP23B-208ENST00000575261 CTSWP56202 376 aa13.44□□□□□ -0.26
TVP23B-208ENST00000575261 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
TVP23B-208ENST00000575261 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
TVP23B-208ENST00000575261 CDC5LQ99459 802 aaKnown RBP13.44□□□□□ -0.26
TVP23B-208ENST00000575261 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
TVP23B-208ENST00000575261 GGA3Q9NZ52 723 aa13.44□□□□□ -0.26
TVP23B-208ENST00000575261 ADM5C9JUS6 153 aa13.43□□□□□ -0.26
TVP23B-208ENST00000575261 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
TVP23B-208ENST00000575261 RSBN1LQ6PCB5 846 aaPredicted RBP13.43□□□□□ -0.26
TVP23B-208ENST00000575261 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
TVP23B-208ENST00000575261 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
TVP23B-208ENST00000575261 C2orf69Q8N8R5 385 aa13.43□□□□□ -0.26
TVP23B-208ENST00000575261 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
TVP23B-208ENST00000575261 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
TVP23B-208ENST00000575261 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
TVP23B-208ENST00000575261 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 ZNF280AP59817 542 aaPredicted RBP13.42□□□□□ -0.26
TVP23B-208ENST00000575261 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 DLK2Q6UY11 383 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 AGBL3Q8NEM8 1001 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 TSR2Q969E8 191 aaKnown RBP13.42□□□□□ -0.26
TVP23B-208ENST00000575261 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
TVP23B-208ENST00000575261 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
TVP23B-208ENST00000575261 CCDC27Q2M243 656 aa13.41□□□□□ -0.26
TVP23B-208ENST00000575261 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
TVP23B-208ENST00000575261 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
TVP23B-208ENST00000575261 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
TVP23B-208ENST00000575261 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
TVP23B-208ENST00000575261 GREM2Q9H772 168 aa13.4□□□□□ -0.26
TVP23B-208ENST00000575261 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
TVP23B-208ENST00000575261 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.27
TVP23B-208ENST00000575261 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 ZNF646O15015 1829 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 NEURL1BA8MQ27 555 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 FAM155AB1AL88 458 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 USP17L8P0C7I0 530 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 ZNF157P51786 506 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 ANGEL2Q5VTE6 544 aaKnown RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 CDCA5Q96FF9 252 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 ZIC5Q96T25 663 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 GMLQ99445 158 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 MYOZ2Q9NPC6 264 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
TVP23B-208ENST00000575261 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 IL16Q14005 1332 aa13.39□□□□□ -0.27
TVP23B-208ENST00000575261 CCDC85CA6NKD9 419 aa13.38□□□□□ -0.27
TVP23B-208ENST00000575261 SLC10A3P09131 477 aa13.38□□□□□ -0.27
TVP23B-208ENST00000575261 SCARF1Q14162 830 aa13.38□□□□□ -0.27
TVP23B-208ENST00000575261 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
TVP23B-208ENST00000575261 MCOLN1Q9GZU1 580 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms