RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 MINPP1Q9UNW1 487 aa20.31■□□□□ 0.84
PFN1-203ENST00000574872 LTBP3Q9NS15 1303 aa20.3■□□□□ 0.84
PFN1-203ENST00000574872 SRGAP3O43295 1099 aa20.3■□□□□ 0.84
PFN1-203ENST00000574872 LMNB1P20700 586 aa20.3■□□□□ 0.84
PFN1-203ENST00000574872 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
PFN1-203ENST00000574872 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
PFN1-203ENST00000574872 PSMD1Q99460 953 aa20.3■□□□□ 0.84
PFN1-203ENST00000574872 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
PFN1-203ENST00000574872 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
PFN1-203ENST00000574872 SIL1Q9H173 461 aa20.29■□□□□ 0.84
PFN1-203ENST00000574872 PA2G4Q9UQ80 394 aaKnown RBP20.29■□□□□ 0.84
PFN1-203ENST00000574872 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
PFN1-203ENST00000574872 PNMA6EA0A0J9YXQ4 647 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 C6orf229H3BNL8 230 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 UFL1O94874 794 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 PTPN12Q05209 780 aaKnown RBP20.28■□□□□ 0.84
PFN1-203ENST00000574872 CHRNDQ07001 517 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 MTX1Q13505 466 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
PFN1-203ENST00000574872 ZBTB40Q9NUA8 1239 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 POLLQ9UGP5 575 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 GGA1Q9UJY5 639 aa20.28■□□□□ 0.84
PFN1-203ENST00000574872 XDHP47989 1333 aa20.27■□□□□ 0.84
PFN1-203ENST00000574872 IARSP41252 1262 aaKnown RBP20.27■□□□□ 0.84
PFN1-203ENST00000574872 TBC1D16Q8TBP0 767 aa20.27■□□□□ 0.84
PFN1-203ENST00000574872 RTFDC1Q9BY42 306 aaPredicted RBP20.27■□□□□ 0.84
PFN1-203ENST00000574872 CHMP4BQ9H444 224 aaKnown RBP20.27■□□□□ 0.84
PFN1-203ENST00000574872 CHD4Q14839 1912 aa20.27■□□□□ 0.84
PFN1-203ENST00000574872 SBF1O95248 1867 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
PFN1-203ENST00000574872 PPIP5K2O43314 1243 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 TAF5LO75529 589 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 AOC3Q16853 763 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 CEP85Q6P2H3 762 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 SUPT20HQ8NEM7 779 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
PFN1-203ENST00000574872 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
PFN1-203ENST00000574872 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
PFN1-203ENST00000574872 ATP8B2P98198 1209 aa20.25■□□□□ 0.83
PFN1-203ENST00000574872 LARGE2Q8N3Y3 721 aa20.25■□□□□ 0.83
PFN1-203ENST00000574872 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
PFN1-203ENST00000574872 RIPOR2Q9Y4F9 1068 aa20.25■□□□□ 0.83
PFN1-203ENST00000574872 SNAP23O00161 211 aa20.24■□□□□ 0.83
PFN1-203ENST00000574872 EYA2O00167 538 aa20.24■□□□□ 0.83
PFN1-203ENST00000574872 ATP2B4P23634 1241 aa20.24■□□□□ 0.83
PFN1-203ENST00000574872 KCNJ4P48050 445 aa20.24■□□□□ 0.83
PFN1-203ENST00000574872 METTL24Q5JXM2 366 aa20.24■□□□□ 0.83
PFN1-203ENST00000574872 COL4A5P29400 1685 aa20.23■□□□□ 0.83
PFN1-203ENST00000574872 IRX6P78412 446 aaPredicted RBP20.23■□□□□ 0.83
PFN1-203ENST00000574872 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
PFN1-203ENST00000574872 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
PFN1-203ENST00000574872 MROH5Q6ZUA9 1318 aa20.23■□□□□ 0.83
PFN1-203ENST00000574872 POLA2Q14181 598 aa20.22■□□□□ 0.83
PFN1-203ENST00000574872 ATG9AQ7Z3C6 839 aa20.22■□□□□ 0.83
PFN1-203ENST00000574872 EYA3Q99504 573 aa20.22■□□□□ 0.83
PFN1-203ENST00000574872 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
PFN1-203ENST00000574872 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 YY1P25490 414 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 KLRK1P26718 216 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 KIAA2012Q0VF49 1180 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 NIM1KQ8IY84 436 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 SSH3Q8TE77 659 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 LEMD3Q9Y2U8 911 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
PFN1-203ENST00000574872 CIAO1O76071 339 aa20.2■□□□□ 0.82
PFN1-203ENST00000574872 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
PFN1-203ENST00000574872 ZC3H12CQ9C0D7 883 aaKnown RBP20.2■□□□□ 0.82
PFN1-203ENST00000574872 DOK7Q18PE1 504 aa20.19■□□□□ 0.82
PFN1-203ENST00000574872 SIRT2Q8IXJ6 389 aa20.19■□□□□ 0.82
PFN1-203ENST00000574872 EXOC6Q8TAG9 804 aa20.19■□□□□ 0.82
PFN1-203ENST00000574872 DBNDD1Q9H9R9 158 aa20.19■□□□□ 0.82
PFN1-203ENST00000574872 DICER1Q9UPY3 1922 aaKnown RBP20.18■□□□□ 0.82
PFN1-203ENST00000574872 IL15P40933 162 aaPredicted RBP20.18■□□□□ 0.82
PFN1-203ENST00000574872 TXNRD3Q86VQ6 643 aa20.18■□□□□ 0.82
PFN1-203ENST00000574872 RPAP2Q8IXW5 612 aaPredicted RBP20.18■□□□□ 0.82
PFN1-203ENST00000574872 VGLL2Q8N8G2 317 aa20.18■□□□□ 0.82
PFN1-203ENST00000574872 VPS33BQ9H267 617 aa20.18■□□□□ 0.82
PFN1-203ENST00000574872 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
PFN1-203ENST00000574872 MED23Q9ULK4 1368 aa20.18■□□□□ 0.82
PFN1-203ENST00000574872 G3V3G9 751 aa20.17■□□□□ 0.82
PFN1-203ENST00000574872 SURF6O75683 361 aaKnown RBP20.17■□□□□ 0.82
PFN1-203ENST00000574872 PDE8BO95263 885 aa20.17■□□□□ 0.82
PFN1-203ENST00000574872 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
PFN1-203ENST00000574872 OS9Q13438 667 aaPredicted RBP20.17■□□□□ 0.82
PFN1-203ENST00000574872 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
PFN1-203ENST00000574872 ZNF526Q8TF50 670 aaPredicted RBP20.17■□□□□ 0.82
PFN1-203ENST00000574872 ZNF541Q9H0D2 1346 aa20.17■□□□□ 0.82
PFN1-203ENST00000574872 ECE2O60344 883 aa20.16■□□□□ 0.82
PFN1-203ENST00000574872 HMMRO75330 724 aa20.16■□□□□ 0.82
PFN1-203ENST00000574872 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
PFN1-203ENST00000574872 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
PFN1-203ENST00000574872 TFCP2Q12800 502 aa20.15■□□□□ 0.82
PFN1-203ENST00000574872 UBE4AQ14139 1066 aa20.15■□□□□ 0.82
PFN1-203ENST00000574872 PUM3Q15397 648 aaKnown RBP20.15■□□□□ 0.82
PFN1-203ENST00000574872 ZNRF3Q9ULT6 936 aa20.15■□□□□ 0.82
PFN1-203ENST00000574872 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
PFN1-203ENST00000574872 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
PFN1-203ENST00000574872 ZC3H4Q9UPT8 1303 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms