RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 ANKRD18AQ8IVF6 992 aa19.53■□□□□ 0.72
SMPD3-212ENST00000574662 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
SMPD3-212ENST00000574662 IL1RAPL2Q9NP60 686 aa19.53■□□□□ 0.72
SMPD3-212ENST00000574662 IGHMBP2P38935 993 aaKnown RBP19.52■□□□□ 0.72
SMPD3-212ENST00000574662 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
SMPD3-212ENST00000574662 TFCP2Q12800 502 aa19.52■□□□□ 0.72
SMPD3-212ENST00000574662 KIF1BPQ96EK5 621 aa19.52■□□□□ 0.72
SMPD3-212ENST00000574662 RBM17Q96I25 401 aaKnown RBP19.52■□□□□ 0.72
SMPD3-212ENST00000574662 C10orf71Q711Q0 1435 aa19.52■□□□□ 0.72
SMPD3-212ENST00000574662 CHRNA5P30532 468 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 GRAPQ13588 217 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 SLC51AQ86UW1 340 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.71
SMPD3-212ENST00000574662 MPHOSPH8Q99549 860 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 CNNM1Q9NRU3 951 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 FBXO3Q9UK99 471 aa19.52■□□□□ 0.71
SMPD3-212ENST00000574662 ERC1Q8IUD2 1116 aa19.51■□□□□ 0.71
SMPD3-212ENST00000574662 CRAMP1Q96RY5 1269 aa19.51■□□□□ 0.71
SMPD3-212ENST00000574662 LRP5O75197 1615 aa19.51■□□□□ 0.71
SMPD3-212ENST00000574662 NPR1P16066 1061 aa19.5■□□□□ 0.71
SMPD3-212ENST00000574662 TBC1D2Q9BYX2 928 aa19.5■□□□□ 0.71
SMPD3-212ENST00000574662 ANTXR1Q9H6X2 564 aa19.5■□□□□ 0.71
SMPD3-212ENST00000574662 SPON1Q9HCB6 807 aa19.5■□□□□ 0.71
SMPD3-212ENST00000574662 BSDC1Q9NW68 430 aaPredicted RBP19.5■□□□□ 0.71
SMPD3-212ENST00000574662 H0YIN7 160 aa19.49■□□□□ 0.71
SMPD3-212ENST00000574662 HELBQ8NG08 1087 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-212ENST00000574662 OTUD7AQ8TE49 926 aaPredicted RBP19.49■□□□□ 0.71
SMPD3-212ENST00000574662 MASTLQ96GX5 879 aa19.49■□□□□ 0.71
SMPD3-212ENST00000574662 C22orf23Q9BZE7 217 aa19.49■□□□□ 0.71
SMPD3-212ENST00000574662 MINPP1Q9UNW1 487 aa19.49■□□□□ 0.71
SMPD3-212ENST00000574662 METTL24Q5JXM2 366 aa19.48■□□□□ 0.71
SMPD3-212ENST00000574662 VGLL2Q8N8G2 317 aa19.48■□□□□ 0.71
SMPD3-212ENST00000574662 IL27Q8NEV9 243 aa19.48■□□□□ 0.71
SMPD3-212ENST00000574662 ZNF622Q969S3 477 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMPD3-212ENST00000574662 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-212ENST00000574662 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
SMPD3-212ENST00000574662 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-212ENST00000574662 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 KCNA3P22001 575 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 SLKQ9H2G2 1235 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-212ENST00000574662 SNAP23O00161 211 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 TAF5LO75529 589 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 BBOX1O75936 387 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 CHRNDQ07001 517 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
SMPD3-212ENST00000574662 WTIPA6NIX2 430 aaPredicted RBP19.46■□□□□ 0.71
SMPD3-212ENST00000574662 DPEP1P16444 411 aa19.46■□□□□ 0.71
SMPD3-212ENST00000574662 TIMM10P62072 90 aa19.46■□□□□ 0.71
SMPD3-212ENST00000574662 CLASRPQ8N2M8 674 aaKnown RBP19.46■□□□□ 0.71
SMPD3-212ENST00000574662 PPP1R1BQ9UD71 204 aaPredicted RBP19.46■□□□□ 0.71
SMPD3-212ENST00000574662 MROH5Q6ZUA9 1318 aa19.46■□□□□ 0.71
SMPD3-212ENST00000574662 SPEF2Q9C093 1822 aa19.46■□□□□ 0.71
SMPD3-212ENST00000574662 PDE8BO95263 885 aa19.45■□□□□ 0.7
SMPD3-212ENST00000574662 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
SMPD3-212ENST00000574662 TNNI3KQ59H18 835 aa19.45■□□□□ 0.7
SMPD3-212ENST00000574662 CCDC8Q9H0W5 538 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-212ENST00000574662 FPGT-TNNI3KV9GXZ4 949 aa19.45■□□□□ 0.7
SMPD3-212ENST00000574662 MFAP1P55081 439 aaKnown RBP19.44■□□□□ 0.7
SMPD3-212ENST00000574662 AACSQ86V21 672 aa19.44■□□□□ 0.7
SMPD3-212ENST00000574662 TGFB2P61812 414 aa19.44■□□□□ 0.7
SMPD3-212ENST00000574662 PLEKHM2Q8IWE5 1019 aa19.44■□□□□ 0.7
SMPD3-212ENST00000574662 GPR108Q9NPR9 543 aa19.44■□□□□ 0.7
SMPD3-212ENST00000574662 TLR7Q9NYK1 1049 aaKnown RBP19.44■□□□□ 0.7
SMPD3-212ENST00000574662 SALL3Q9BXA9 1300 aa19.44■□□□□ 0.7
SMPD3-212ENST00000574662 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
SMPD3-212ENST00000574662 OLFM4Q6UX06 510 aa19.43■□□□□ 0.7
SMPD3-212ENST00000574662 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
SMPD3-212ENST00000574662 CD2APQ9Y5K6 639 aa19.43■□□□□ 0.7
SMPD3-212ENST00000574662 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-212ENST00000574662 A0A1B0GUL7 405 aa19.42■□□□□ 0.7
SMPD3-212ENST00000574662 FGFR2P21802 821 aa19.42■□□□□ 0.7
SMPD3-212ENST00000574662 PRPF40BQ6NWY9 871 aaKnown RBP19.42■□□□□ 0.7
SMPD3-212ENST00000574662 SP8Q8IXZ3 490 aa19.42■□□□□ 0.7
SMPD3-212ENST00000574662 CNKSR1Q969H4 720 aa19.42■□□□□ 0.7
SMPD3-212ENST00000574662 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
SMPD3-212ENST00000574662 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
SMPD3-212ENST00000574662 ATP2B3Q16720 1220 aa19.41■□□□□ 0.7
SMPD3-212ENST00000574662 TSHZ3Q63HK5 1081 aa19.41■□□□□ 0.7
SMPD3-212ENST00000574662 HSCBQ8IWL3 235 aa19.41■□□□□ 0.7
SMPD3-212ENST00000574662 DBNDD2Q9BQY9 259 aa19.41■□□□□ 0.7
SMPD3-212ENST00000574662 DBNLQ9UJU6 430 aaKnown RBP19.41■□□□□ 0.7
SMPD3-212ENST00000574662 AKAP2Q9Y2D5 859 aa19.41■□□□□ 0.7
SMPD3-212ENST00000574662 ATP6V0A2Q9Y487 856 aa19.41■□□□□ 0.7
SMPD3-212ENST00000574662 ADORA1P30542 326 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 GPSM2P81274 684 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 CHMP5Q9NZZ3 219 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 BRPF3Q9ULD4 1205 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 ZNF609O15014 1411 aa19.4■□□□□ 0.7
SMPD3-212ENST00000574662 RBM25P49756 843 aaKnown RBP19.39■□□□□ 0.7
SMPD3-212ENST00000574662 PDE1AP54750 535 aa19.39■□□□□ 0.7
SMPD3-212ENST00000574662 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.7
SMPD3-212ENST00000574662 L1TD1Q5T7N2 865 aaKnown RBP19.39■□□□□ 0.7
SMPD3-212ENST00000574662 TMC4Q7Z404 712 aa19.39■□□□□ 0.7
SMPD3-212ENST00000574662 ANKRD2Q9GZV1 360 aa19.39■□□□□ 0.7
SMPD3-212ENST00000574662 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.7
SMPD3-212ENST00000574662 STAP2Q9UGK3 403 aa19.39■□□□□ 0.7
SMPD3-212ENST00000574662 SLX4Q8IY92 1834 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms