RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
SMG6-215ENST00000574501 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 ME1P48163 572 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 ZSCAN26Q16670 478 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 CCDC191Q8NCU4 936 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 CCDC150Q8NCX0 1101 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 EYA1Q99502 592 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 RASSF4Q9H2L5 321 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 TMX1Q9H3N1 280 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
SMG6-215ENST00000574501 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
SMG6-215ENST00000574501 TBC1D8O95759 1140 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 ANXA1P04083 346 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 MLECQ14165 292 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 DPCR1Q3MIW9 517 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 Q6ZUG5 572 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 FAM177A1Q8N128 213 aaPredicted RBP16.79■□□□□ 0.28
SMG6-215ENST00000574501 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 TADA3O75528 432 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 SMC1AQ14683 1233 aaKnown RBP16.79■□□□□ 0.28
SMG6-215ENST00000574501 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
SMG6-215ENST00000574501 SIL1Q9H173 461 aa16.78■□□□□ 0.28
SMG6-215ENST00000574501 MYO1CO00159 1063 aa16.78■□□□□ 0.28
SMG6-215ENST00000574501 BIN1O00499 593 aa16.78■□□□□ 0.28
SMG6-215ENST00000574501 EVCP57679 992 aa16.78■□□□□ 0.28
SMG6-215ENST00000574501 TRIM65Q6PJ69 517 aa16.78■□□□□ 0.28
SMG6-215ENST00000574501 ALDH8A1Q9H2A2 487 aaPredicted RBP16.78■□□□□ 0.28
SMG6-215ENST00000574501 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
SMG6-215ENST00000574501 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 GUCY1B3Q02153 619 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 SCRN1Q12765 414 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 GPS2Q13227 327 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 DNAAF4Q8WXU2 420 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 UBXN6Q9BZV1 441 aa16.77■□□□□ 0.28
SMG6-215ENST00000574501 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.27
SMG6-215ENST00000574501 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.27
SMG6-215ENST00000574501 ACEP12821 1306 aa16.77■□□□□ 0.27
SMG6-215ENST00000574501 NRDCO43847 1150 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 PTPN21Q16825 1174 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 CC2D1AQ6P1N0 951 aaPredicted RBP16.76■□□□□ 0.27
SMG6-215ENST00000574501 CHPF2Q9P2E5 772 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 PHLPP2Q6ZVD8 1323 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 METP08581 1390 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 EFCAB8A8MWE9 144 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 HIP1O00291 1037 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 ZRSR1Q15695 479 aaKnown RBP16.76■□□□□ 0.27
SMG6-215ENST00000574501 REXO1L1PQ8IX06 675 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 EAF2Q96CJ1 260 aaPredicted RBP16.76■□□□□ 0.27
SMG6-215ENST00000574501 EDC3Q96F86 508 aaKnown RBP16.76■□□□□ 0.27
SMG6-215ENST00000574501 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
SMG6-215ENST00000574501 LMAN1P49257 510 aa16.75■□□□□ 0.27
SMG6-215ENST00000574501 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
SMG6-215ENST00000574501 ISM2Q6H9L7 571 aa16.75■□□□□ 0.27
SMG6-215ENST00000574501 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
SMG6-215ENST00000574501 UTP14AQ9BVJ6 771 aaKnown RBP16.75■□□□□ 0.27
SMG6-215ENST00000574501 PARP3Q9Y6F1 533 aa16.75■□□□□ 0.27
SMG6-215ENST00000574501 CEP170BQ9Y4F5 1589 aaPredicted RBP16.75■□□□□ 0.27
SMG6-215ENST00000574501 LMOD1P29536 600 aaPredicted RBP16.75■□□□□ 0.27
SMG6-215ENST00000574501 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 NDUFA8P51970 172 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 LRRFIP1Q32MZ4 808 aaKnown RBP16.74■□□□□ 0.27
SMG6-215ENST00000574501 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 ITSN1Q15811 1721 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 TAF5LO75529 589 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 TUBB4AP04350 444 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 CHGBP05060 677 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 KCNJ6P48051 423 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 AMPHP49418 695 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 FMR1NBQ8N0W7 255 aaPredicted RBP16.74■□□□□ 0.27
SMG6-215ENST00000574501 C9orf78Q9NZ63 289 aaPredicted RBP16.74■□□□□ 0.27
SMG6-215ENST00000574501 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 KIAA1468Q9P260 1216 aa16.74■□□□□ 0.27
SMG6-215ENST00000574501 AKAP12Q02952 1782 aa16.73■□□□□ 0.27
SMG6-215ENST00000574501 SASH1O94885 1247 aa16.73■□□□□ 0.27
SMG6-215ENST00000574501 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
SMG6-215ENST00000574501 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
SMG6-215ENST00000574501 SRRTQ9BXP5 876 aaKnown RBP16.73■□□□□ 0.27
SMG6-215ENST00000574501 ADAM21Q9UKJ8 722 aa16.73■□□□□ 0.27
SMG6-215ENST00000574501 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
SMG6-215ENST00000574501 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
SMG6-215ENST00000574501 ATP8B1O43520 1251 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 TAF7LQ5H9L4 462 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
SMG6-215ENST00000574501 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
SMG6-215ENST00000574501 SNRKQ9NRH2 765 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms