RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ANKIB1Q9P2G1 1089 aa15.71■□□□□ 0.11
CCDC40-210ENST00000573903 POLLQ9UGP5 575 aa15.71■□□□□ 0.11
CCDC40-210ENST00000573903 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-210ENST00000573903 PDE8AO60658 829 aa15.7■□□□□ 0.1
CCDC40-210ENST00000573903 UFL1O94874 794 aa15.7■□□□□ 0.1
CCDC40-210ENST00000573903 PCCAP05165 728 aaPredicted RBP15.7■□□□□ 0.1
CCDC40-210ENST00000573903 HIRAP54198 1017 aaPredicted RBP15.7■□□□□ 0.1
CCDC40-210ENST00000573903 DOK7Q18PE1 504 aa15.7■□□□□ 0.1
CCDC40-210ENST00000573903 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
CCDC40-210ENST00000573903 COL4A1P02462 1669 aa15.7■□□□□ 0.1
CCDC40-210ENST00000573903 SHTN1A0MZ66 631 aa15.69■□□□□ 0.1
CCDC40-210ENST00000573903 TBC1D10BQ4KMP7 808 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-210ENST00000573903 DCPSQ96C86 337 aaKnown RBP15.69■□□□□ 0.1
CCDC40-210ENST00000573903 PODXL2Q9NZ53 605 aa15.69■□□□□ 0.1
CCDC40-210ENST00000573903 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
CCDC40-210ENST00000573903 CA12O43570 354 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 AOC2O75106 756 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 SAMD7Q7Z3H4 446 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 USP48Q86UV5 1035 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 ANKRD18AQ8IVF6 992 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 METTL22Q9BUU2 404 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-210ENST00000573903 STK31Q9BXU1 1019 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 SEC31BQ9NQW1 1179 aa15.68■□□□□ 0.1
CCDC40-210ENST00000573903 MYH3P11055 1940 aa15.67■□□□□ 0.1
CCDC40-210ENST00000573903 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
CCDC40-210ENST00000573903 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
CCDC40-210ENST00000573903 MAP3K2Q9Y2U5 619 aa15.67■□□□□ 0.1
CCDC40-210ENST00000573903 XDHP47989 1333 aa15.67■□□□□ 0.1
CCDC40-210ENST00000573903 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
CCDC40-210ENST00000573903 BRPF1P55201 1214 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-210ENST00000573903 HUNKP57058 714 aa15.66■□□□□ 0.1
CCDC40-210ENST00000573903 NOGQ13253 232 aa15.66■□□□□ 0.1
CCDC40-210ENST00000573903 KIF4BQ2VIQ3 1234 aa15.66■□□□□ 0.1
CCDC40-210ENST00000573903 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-210ENST00000573903 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
CCDC40-210ENST00000573903 KSR2Q6VAB6 950 aa15.65■□□□□ 0.1
CCDC40-210ENST00000573903 SULF1Q8IWU6 871 aa15.65■□□□□ 0.1
CCDC40-210ENST00000573903 C2orf69Q8N8R5 385 aa15.65■□□□□ 0.1
CCDC40-210ENST00000573903 ABHD8Q96I13 439 aa15.65■□□□□ 0.1
CCDC40-210ENST00000573903 PSME4Q14997 1843 aa15.65■□□□□ 0.1
CCDC40-210ENST00000573903 SCN9AQ15858 1988 aa15.65■□□□□ 0.1
CCDC40-210ENST00000573903 SPEF2Q9C093 1822 aa15.64■□□□□ 0.09
CCDC40-210ENST00000573903 POLR2AP24928 1970 aaKnown RBP15.64■□□□□ 0.09
CCDC40-210ENST00000573903 VIL1P09327 827 aaKnown RBP15.64■□□□□ 0.09
CCDC40-210ENST00000573903 ATP2B4P23634 1241 aa15.64■□□□□ 0.09
CCDC40-210ENST00000573903 CTSWP56202 376 aa15.64■□□□□ 0.09
CCDC40-210ENST00000573903 JARID2Q92833 1246 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-210ENST00000573903 GBA2Q9HCG7 927 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-210ENST00000573903 KCNQ5Q9NR82 932 aa15.64■□□□□ 0.09
CCDC40-210ENST00000573903 TSKSQ9UJT2 592 aa15.64■□□□□ 0.09
CCDC40-210ENST00000573903 PI4KAP2A4QPH2 592 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 ADM5C9JUS6 153 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 EGFRP00533 1210 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 TSPYL6Q8N831 410 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 PI4KAP1Q8N8J0 262 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 AGBL3Q8NEM8 1001 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
CCDC40-210ENST00000573903 GGA3Q9NZ52 723 aa15.63■□□□□ 0.09
CCDC40-210ENST00000573903 ZNF609O15014 1411 aa15.62■□□□□ 0.09
CCDC40-210ENST00000573903 CCDC27Q2M243 656 aa15.62■□□□□ 0.09
CCDC40-210ENST00000573903 TWISTNBQ3B726 338 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-210ENST00000573903 RGMBQ6NW40 437 aa15.62■□□□□ 0.09
CCDC40-210ENST00000573903 RSBN1LQ6PCB5 846 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-210ENST00000573903 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
CCDC40-210ENST00000573903 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
CCDC40-210ENST00000573903 MED23Q9ULK4 1368 aa15.61■□□□□ 0.09
CCDC40-210ENST00000573903 USP17L3A6NCW0 530 aa15.6■□□□□ 0.09
CCDC40-210ENST00000573903 USP17L4A6NCW7 530 aa15.6■□□□□ 0.09
CCDC40-210ENST00000573903 ANP32CO43423 234 aa15.6■□□□□ 0.09
CCDC40-210ENST00000573903 IGKV5-2P06315 115 aa15.6■□□□□ 0.09
CCDC40-210ENST00000573903 USP17L1Q7RTZ2 530 aa15.6■□□□□ 0.09
CCDC40-210ENST00000573903 NEURL1BA8MQ27 555 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 IGHMBP2P38935 993 aaKnown RBP15.59■□□□□ 0.09
CCDC40-210ENST00000573903 ZNF157P51786 506 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-210ENST00000573903 ZNF280AP59817 542 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-210ENST00000573903 CWF19L2Q2TBE0 894 aaKnown RBP15.59■□□□□ 0.09
CCDC40-210ENST00000573903 DLK2Q6UY11 383 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 GREM2Q9H772 168 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 BSDC1Q9NW68 430 aaPredicted RBP15.59■□□□□ 0.09
CCDC40-210ENST00000573903 IL16Q14005 1332 aa15.59■□□□□ 0.09
CCDC40-210ENST00000573903 CACNA1FO60840 1977 aa15.58■□□□□ 0.09
CCDC40-210ENST00000573903 CCDC85CA6NKD9 419 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 SCARF1Q14162 830 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 ANGEL2Q5VTE6 544 aaKnown RBP15.58■□□□□ 0.08
CCDC40-210ENST00000573903 UBE3BQ7Z3V4 1068 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 FBXW7Q969H0 707 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 CDCA5Q96FF9 252 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 MINPP1Q9UNW1 487 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 CASP8AP2Q9UKL3 1982 aa15.58■□□□□ 0.08
CCDC40-210ENST00000573903 AKAP11Q9UKA4 1901 aa15.57■□□□□ 0.08
CCDC40-210ENST00000573903 CCT4P50991 539 aaKnown RBP15.57■□□□□ 0.08
CCDC40-210ENST00000573903 FKBP5Q13451 457 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms