RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
CDC27-215ENST00000573550 JPH1Q9HDC5 661 aaPredicted RBP8.65□□□□□ -1.02
CDC27-215ENST00000573550 BRPF3Q9ULD4 1205 aa8.65□□□□□ -1.02
CDC27-215ENST00000573550 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
CDC27-215ENST00000573550 J3QW42 95 aa8.64□□□□□ -1.03
CDC27-215ENST00000573550 SIK1P57059 783 aa8.64□□□□□ -1.03
CDC27-215ENST00000573550 EHHADHQ08426 723 aa8.64□□□□□ -1.03
CDC27-215ENST00000573550 TTC16Q8NEE8 873 aa8.64□□□□□ -1.03
CDC27-215ENST00000573550 CHRDQ9H2X0 955 aa8.64□□□□□ -1.03
CDC27-215ENST00000573550 PIK3R2O00459 728 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 NDUFB5O43674 189 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 LILRB5O75023 590 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 TNFRSF21O75509 655 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 KIF4AO95239 1232 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 EIF2AK2P19525 551 aaKnown RBP8.63□□□□□ -1.03
CDC27-215ENST00000573550 COL8A1P27658 744 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 AFF1P51825 1210 aaKnown RBP8.63□□□□□ -1.03
CDC27-215ENST00000573550 RASSF7Q02833 373 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 GRIK5Q16478 980 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 C1orf127Q8N9H9 656 aa8.63□□□□□ -1.03
CDC27-215ENST00000573550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.63□□□□□ -1.03
CDC27-215ENST00000573550 RGS9O75916 674 aaPredicted RBP8.62□□□□□ -1.03
CDC27-215ENST00000573550 ELMSAN1Q6PJG2 1045 aa8.62□□□□□ -1.03
CDC27-215ENST00000573550 FAM129BQ96TA1 746 aa8.62□□□□□ -1.03
CDC27-215ENST00000573550 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
CDC27-215ENST00000573550 FOXD3Q9UJU5 478 aaPredicted RBP8.62□□□□□ -1.03
CDC27-215ENST00000573550 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
CDC27-215ENST00000573550 GHRHP01286 108 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 IGHA2P01877 340 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 HYAL2Q12891 473 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 SNX29Q8TEQ0 813 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 TTC9Q92623 222 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 PLD4Q96BZ4 506 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
CDC27-215ENST00000573550 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
CDC27-215ENST00000573550 NOP53Q9NZM5 478 aaKnown RBP8.61□□□□□ -1.03
CDC27-215ENST00000573550 BIN2Q9UBW5 565 aaPredicted RBP8.61□□□□□ -1.03
CDC27-215ENST00000573550 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
CDC27-215ENST00000573550 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
CDC27-215ENST00000573550 RBCK1Q9BYM8 510 aa8.6□□□□□ -1.03
CDC27-215ENST00000573550 SALL4Q9UJQ4 1053 aa8.6□□□□□ -1.03
CDC27-215ENST00000573550 CES1P23141 567 aa8.59□□□□□ -1.03
CDC27-215ENST00000573550 AEBP1Q8IUX7 1158 aa8.59□□□□□ -1.03
CDC27-215ENST00000573550 CEP120Q8N960 986 aa8.59□□□□□ -1.03
CDC27-215ENST00000573550 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
CDC27-215ENST00000573550 EREGO14944 169 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 GPR182O15218 404 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 PHACTR2O75167 634 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 GDF11O95390 407 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 ATP11AP98196 1134 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 NCAPG2Q86XI2 1143 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 RBSNQ9H1K0 784 aa8.58□□□□□ -1.04
CDC27-215ENST00000573550 ACPPP15309 386 aa8.57□□□□□ -1.04
CDC27-215ENST00000573550 ALYREFQ86V81 257 aaKnown RBP8.57□□□□□ -1.04
CDC27-215ENST00000573550 TMEM151AQ8N4L1 468 aa8.57□□□□□ -1.04
CDC27-215ENST00000573550 PMEPA1Q969W9 287 aa8.57□□□□□ -1.04
CDC27-215ENST00000573550 SPACA7Q96KW9 195 aa8.57□□□□□ -1.04
CDC27-215ENST00000573550 DCTN4Q9UJW0 460 aa8.57□□□□□ -1.04
CDC27-215ENST00000573550 MSL1Q68DK7 614 aa8.56□□□□□ -1.04
CDC27-215ENST00000573550 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
CDC27-215ENST00000573550 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
CDC27-215ENST00000573550 BAG6P46379 1132 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 ADAMTSL4Q6UY14 1074 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 DMRTB1Q96MA1 342 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 PBX4Q9BYU1 374 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 TRIM33Q9UPN9 1127 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 AMOTL2Q9Y2J4 779 aa8.55□□□□□ -1.04
CDC27-215ENST00000573550 KRBA1A5PL33 1030 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 SPDYE3A6NKU9 549 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 NFKBIEO00221 500 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 ORC1Q13415 861 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
CDC27-215ENST00000573550 DMRTC2Q8IXT2 367 aaPredicted RBP8.54□□□□□ -1.04
CDC27-215ENST00000573550 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
CDC27-215ENST00000573550 DZANK1Q9NVP4 752 aa8.54□□□□□ -1.04
CDC27-215ENST00000573550 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
CDC27-215ENST00000573550 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDC27-215ENST00000573550 ITGB2P05107 769 aa8.53□□□□□ -1.04
CDC27-215ENST00000573550 SPATA31C1P0DKV0 1188 aa8.53□□□□□ -1.04
CDC27-215ENST00000573550 MAPK1P28482 360 aa8.53□□□□□ -1.04
CDC27-215ENST00000573550 PEAR1Q5VY43 1037 aaPredicted RBP8.53□□□□□ -1.04
CDC27-215ENST00000573550 CEP135Q66GS9 1140 aa8.53□□□□□ -1.04
CDC27-215ENST00000573550 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
CDC27-215ENST00000573550 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
CDC27-215ENST00000573550 EDN3P14138 238 aa8.52□□□□□ -1.05
CDC27-215ENST00000573550 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
CDC27-215ENST00000573550 WFDC8Q8IUA0 241 aa8.52□□□□□ -1.05
CDC27-215ENST00000573550 HHIPQ96QV1 700 aa8.52□□□□□ -1.05
CDC27-215ENST00000573550 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.05
CDC27-215ENST00000573550 LATS2Q9NRM7 1088 aa8.52□□□□□ -1.05
CDC27-215ENST00000573550 TRPA1O75762 1119 aa8.51□□□□□ -1.05
CDC27-215ENST00000573550 PRRT3Q5FWE3 981 aa8.51□□□□□ -1.05
CDC27-215ENST00000573550 SND1Q7KZF4 910 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDC27-215ENST00000573550 POP1Q99575 1024 aaKnown RBP8.51□□□□□ -1.05
CDC27-215ENST00000573550 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms