RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.27
TVP23A-207ENST00000573360 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
TVP23A-207ENST00000573360 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
TVP23A-207ENST00000573360 EVI5LQ96CN4 794 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 COL22A1Q8NFW1 1626 aaPredicted RBP16.76■□□□□ 0.27
TVP23A-207ENST00000573360 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 SCARF1Q14162 830 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 ABCF2Q9UG63 623 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
TVP23A-207ENST00000573360 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
TVP23A-207ENST00000573360 NLRP3Q96P20 1036 aa16.75■□□□□ 0.27
TVP23A-207ENST00000573360 RRAGDQ9NQL2 400 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-207ENST00000573360 PTH1RQ03431 593 aa16.75■□□□□ 0.27
TVP23A-207ENST00000573360 PARP10Q53GL7 1025 aa16.75■□□□□ 0.27
TVP23A-207ENST00000573360 POTEAQ6S8J7 498 aa16.75■□□□□ 0.27
TVP23A-207ENST00000573360 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
TVP23A-207ENST00000573360 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 APPP05067 770 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 ZAP70P43403 619 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
TVP23A-207ENST00000573360 NTSR2O95665 410 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 PHKA1P46020 1223 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 EN1Q05925 392 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-207ENST00000573360 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
TVP23A-207ENST00000573360 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 SHANK3Q9BYB0 1731 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 ZNF589Q86UQ0 364 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-207ENST00000573360 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-207ENST00000573360 AKAP2Q9Y2D5 859 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 ITGB4P16144 1822 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 FGD1P98174 961 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-207ENST00000573360 NFIXQ14938 502 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
TVP23A-207ENST00000573360 BCAMP50895 628 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
TVP23A-207ENST00000573360 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 SSFA2P28290 1259 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 GYG1P46976 350 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
TVP23A-207ENST00000573360 SGSM2O43147 1006 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 GRPEL1Q9HAV7 217 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
TVP23A-207ENST00000573360 CSF1RP07333 972 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 MRE11P49959 708 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 HAND2P61296 217 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
TVP23A-207ENST00000573360 GLI3P10071 1580 aa16.71■□□□□ 0.27
TVP23A-207ENST00000573360 ST18O60284 1047 aa16.71■□□□□ 0.26
TVP23A-207ENST00000573360 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.26
TVP23A-207ENST00000573360 JAKMIP1Q96N16 626 aaKnown RBP16.71■□□□□ 0.26
TVP23A-207ENST00000573360 PDE8BO95263 885 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 CHRNDQ07001 517 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
TVP23A-207ENST00000573360 KIF2CQ99661 725 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 ATP5JP18859 108 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
TVP23A-207ENST00000573360 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
TVP23A-207ENST00000573360 CASTP20810 708 aaKnown RBP16.69■□□□□ 0.26
TVP23A-207ENST00000573360 PROM2Q8N271 834 aa16.69■□□□□ 0.26
TVP23A-207ENST00000573360 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
TVP23A-207ENST00000573360 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
TVP23A-207ENST00000573360 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
TVP23A-207ENST00000573360 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
TVP23A-207ENST00000573360 CCDC102BQ68D86 513 aa16.68■□□□□ 0.26
TVP23A-207ENST00000573360 SLC5A1P13866 664 aa16.68■□□□□ 0.26
TVP23A-207ENST00000573360 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
TVP23A-207ENST00000573360 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
TVP23A-207ENST00000573360 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
TVP23A-207ENST00000573360 SLC9C2Q5TAH2 1124 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 MCTP1Q6DN14 999 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 CLEC4GQ6UXB4 293 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 CNTNAP4Q9C0A0 1308 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
TVP23A-207ENST00000573360 RABEP1Q15276 862 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 LRP2BPQ9P2M1 347 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 SERPINB2P05120 415 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 ZKSCAN1P17029 563 aaPredicted RBP16.67■□□□□ 0.26
TVP23A-207ENST00000573360 STK3Q13188 491 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 TOMM22Q9NS69 142 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 ATRNO75882 1429 aa16.67■□□□□ 0.26
TVP23A-207ENST00000573360 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
TVP23A-207ENST00000573360 MCAMP43121 646 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
TVP23A-207ENST00000573360 EZH2Q15910 746 aaKnown RBP16.66■□□□□ 0.26
TVP23A-207ENST00000573360 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms