RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 RGS19P49795 217 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 RGMBQ6NW40 437 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 C2orf69Q8N8R5 385 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
TRAPPC1-205ENST00000572656 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
TRAPPC1-205ENST00000572656 VIL1P09327 827 aaKnown RBP12.79□□□□□ -0.36
TRAPPC1-205ENST00000572656 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
TRAPPC1-205ENST00000572656 GBA2Q9HCG7 927 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC1-205ENST00000572656 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
TRAPPC1-205ENST00000572656 TRPM7Q96QT4 1865 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 ADM5C9JUS6 153 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 G3V3G9 751 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 UFL1O94874 794 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 ANKIB1Q9P2G1 1089 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 GGA1Q9UJY5 639 aa12.78□□□□□ -0.36
TRAPPC1-205ENST00000572656 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC1-205ENST00000572656 GNAI1P63096 354 aa12.77□□□□□ -0.37
TRAPPC1-205ENST00000572656 CALD1Q05682 793 aaKnown RBP12.77□□□□□ -0.37
TRAPPC1-205ENST00000572656 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
TRAPPC1-205ENST00000572656 MYD88Q99836 296 aa12.77□□□□□ -0.37
TRAPPC1-205ENST00000572656 COL4A1P02462 1669 aa12.77□□□□□ -0.37
TRAPPC1-205ENST00000572656 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 PDE8AO60658 829 aa12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 ZNF157P51786 506 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 ZNF280AP59817 542 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 DGKZQ13574 1117 aa12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 SAGE1Q9NXZ1 904 aa12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 GGA3Q9NZ52 723 aa12.76□□□□□ -0.37
TRAPPC1-205ENST00000572656 APAF1O14727 1248 aa12.75□□□□□ -0.37
TRAPPC1-205ENST00000572656 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
TRAPPC1-205ENST00000572656 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC1-205ENST00000572656 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC1-205ENST00000572656 ZNF609O15014 1411 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 XDHP47989 1333 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 SCARF1Q14162 830 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 C8orf58Q8NAV2 365 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 GMLQ99445 158 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 TAF1P21675 1872 aa12.74□□□□□ -0.37
TRAPPC1-205ENST00000572656 TRPA1O75762 1119 aa12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 SLC10A3P09131 477 aa12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 USP17L8P0C7I0 530 aa12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 ATP2B4P23634 1241 aa12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
TRAPPC1-205ENST00000572656 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 FKBP1BP68106 108 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 CSRNP1Q96S65 589 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 MYOZ2Q9NPC6 264 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
TRAPPC1-205ENST00000572656 PITPNM2Q9BZ72 1349 aa12.71□□□□□ -0.37
TRAPPC1-205ENST00000572656 SLC34A2O95436 690 aa12.71□□□□□ -0.37
TRAPPC1-205ENST00000572656 IGKV5-2P06315 115 aa12.71□□□□□ -0.37
TRAPPC1-205ENST00000572656 CTSWP56202 376 aa12.71□□□□□ -0.37
TRAPPC1-205ENST00000572656 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
TRAPPC1-205ENST00000572656 BSDC1Q9NW68 430 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC1-205ENST00000572656 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
TRAPPC1-205ENST00000572656 RASAL3Q86YV0 1011 aa12.7□□□□□ -0.38
TRAPPC1-205ENST00000572656 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
TRAPPC1-205ENST00000572656 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
TRAPPC1-205ENST00000572656 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
TRAPPC1-205ENST00000572656 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
TRAPPC1-205ENST00000572656 WTIPA6NIX2 430 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC1-205ENST00000572656 NEXNQ0ZGT2 675 aa12.69□□□□□ -0.38
TRAPPC1-205ENST00000572656 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
TRAPPC1-205ENST00000572656 GREM2Q9H772 168 aa12.69□□□□□ -0.38
TRAPPC1-205ENST00000572656 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
TRAPPC1-205ENST00000572656 NBPF9Q3BBW0 867 aa12.68□□□□□ -0.38
TRAPPC1-205ENST00000572656 DACT2Q5SW24 774 aa12.68□□□□□ -0.38
TRAPPC1-205ENST00000572656 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
TRAPPC1-205ENST00000572656 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms