RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
SMG6-210ENST00000572205 BBOX1O75936 387 aa11.08□□□□□ -0.64
SMG6-210ENST00000572205 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
SMG6-210ENST00000572205 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
SMG6-210ENST00000572205 GSE1Q14687 1217 aa11.08□□□□□ -0.64
SMG6-210ENST00000572205 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
SMG6-210ENST00000572205 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
SMG6-210ENST00000572205 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
SMG6-210ENST00000572205 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
SMG6-210ENST00000572205 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 C1QTNF8P60827 252 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 GPSM2P81274 684 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 HNRNPUQ00839 825 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMG6-210ENST00000572205 NEXNQ0ZGT2 675 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 TNNQ9UQP3 1299 aa11.07□□□□□ -0.64
SMG6-210ENST00000572205 GRM8O00222 908 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 ALDH1L1O75891 902 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
SMG6-210ENST00000572205 KIAA2012Q0VF49 1180 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 AOC3Q16853 763 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 TMC4Q7Z404 712 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 ANKRD44Q8N8A2 993 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
SMG6-210ENST00000572205 TRPM7Q96QT4 1865 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
SMG6-210ENST00000572205 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
SMG6-210ENST00000572205 RPS8P62241 208 aaKnown RBP11.05□□□□□ -0.64
SMG6-210ENST00000572205 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
SMG6-210ENST00000572205 CCDC152Q4G0S7 254 aa11.05□□□□□ -0.64
SMG6-210ENST00000572205 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
SMG6-210ENST00000572205 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
SMG6-210ENST00000572205 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
SMG6-210ENST00000572205 SMC4Q9NTJ3 1288 aa11.05□□□□□ -0.64
SMG6-210ENST00000572205 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
SMG6-210ENST00000572205 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
SMG6-210ENST00000572205 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
SMG6-210ENST00000572205 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
SMG6-210ENST00000572205 SCNN1DP51172 638 aa11.04□□□□□ -0.64
SMG6-210ENST00000572205 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
SMG6-210ENST00000572205 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
SMG6-210ENST00000572205 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
SMG6-210ENST00000572205 BCAR3O75815 825 aa11.03□□□□□ -0.64
SMG6-210ENST00000572205 ITGA6P23229 1130 aa11.03□□□□□ -0.64
SMG6-210ENST00000572205 DPP8Q6V1X1 898 aaPredicted RBP11.03□□□□□ -0.64
SMG6-210ENST00000572205 MPNDQ8N594 471 aa11.03□□□□□ -0.64
SMG6-210ENST00000572205 SRCIN1Q9C0H9 1055 aa11.03□□□□□ -0.64
SMG6-210ENST00000572205 VPS33BQ9H267 617 aa11.03□□□□□ -0.64
SMG6-210ENST00000572205 PPIP5K2O43314 1243 aa11.02□□□□□ -0.65
SMG6-210ENST00000572205 TRIM27P14373 513 aa11.02□□□□□ -0.65
SMG6-210ENST00000572205 KLRK1P26718 216 aa11.02□□□□□ -0.65
SMG6-210ENST00000572205 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
SMG6-210ENST00000572205 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
SMG6-210ENST00000572205 NOB1Q9ULX3 412 aaKnown RBP11.02□□□□□ -0.65
SMG6-210ENST00000572205 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.65
SMG6-210ENST00000572205 POLR2AP24928 1970 aaKnown RBP11.02□□□□□ -0.65
SMG6-210ENST00000572205 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
SMG6-210ENST00000572205 STK25O00506 426 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 TOMM70O94826 608 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
SMG6-210ENST00000572205 CXCL9Q07325 125 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 SLC4A10Q6U841 1118 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 LMBR1LQ6UX01 489 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 TXNRD3Q86VQ6 643 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 GPC2Q8N158 579 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 LARGE2Q8N3Y3 721 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
SMG6-210ENST00000572205 BICC1Q9H694 974 aaKnown RBP11.01□□□□□ -0.65
SMG6-210ENST00000572205 XDHP47989 1333 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
SMG6-210ENST00000572205 LAMB1P07942 1786 aa11□□□□□ -0.65
SMG6-210ENST00000572205 SHTN1A0MZ66 631 aa11□□□□□ -0.65
SMG6-210ENST00000572205 SNAP23O00161 211 aa11□□□□□ -0.65
SMG6-210ENST00000572205 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
SMG6-210ENST00000572205 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
SMG6-210ENST00000572205 ANKRD18AQ8IVF6 992 aa11□□□□□ -0.65
SMG6-210ENST00000572205 ARHGAP45Q92619 1136 aa11□□□□□ -0.65
SMG6-210ENST00000572205 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
SMG6-210ENST00000572205 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
SMG6-210ENST00000572205 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
SMG6-210ENST00000572205 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
SMG6-210ENST00000572205 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
SMG6-210ENST00000572205 UFL1O94874 794 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 VEGFAP15692 232 aaPredicted RBP10.99□□□□□ -0.65
SMG6-210ENST00000572205 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 NIM1KQ8IY84 436 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
SMG6-210ENST00000572205 MEIS3Q99687 375 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 DBNDD1Q9H9R9 158 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 ZNRF3Q9ULT6 936 aa10.99□□□□□ -0.65
SMG6-210ENST00000572205 ECE2O60344 883 aa10.98□□□□□ -0.65
SMG6-210ENST00000572205 RLBP1P12271 317 aa10.98□□□□□ -0.65
SMG6-210ENST00000572205 CHRNDQ07001 517 aa10.98□□□□□ -0.65
SMG6-210ENST00000572205 PUS3Q9BZE2 481 aaKnown RBP10.98□□□□□ -0.65
SMG6-210ENST00000572205 PASKQ96RG2 1323 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms