RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 DGKZQ13574 1117 aa25.01■■□□□ 1.59
NUP88-203ENST00000572019 DUSP27Q5VZP5 1158 aa25.01■■□□□ 1.59
NUP88-203ENST00000572019 DBF4Q9UBU7 674 aaPredicted RBP25.01■■□□□ 1.59
NUP88-203ENST00000572019 RGMBQ6NW40 437 aa25■■□□□ 1.59
NUP88-203ENST00000572019 JARID2Q92833 1246 aaPredicted RBP25■■□□□ 1.59
NUP88-203ENST00000572019 RUNDC1Q96C34 613 aa25■■□□□ 1.59
NUP88-203ENST00000572019 CFAP44Q96MT7 982 aa25■■□□□ 1.59
NUP88-203ENST00000572019 GBA2Q9HCG7 927 aaPredicted RBP25■■□□□ 1.59
NUP88-203ENST00000572019 RPS8P62241 208 aaKnown RBP24.99■■□□□ 1.59
NUP88-203ENST00000572019 MBIPQ9NS73 344 aa24.99■■□□□ 1.59
NUP88-203ENST00000572019 SPEF2Q9C093 1822 aa24.98■■□□□ 1.59
NUP88-203ENST00000572019 HOXB7P09629 217 aa24.98■■□□□ 1.59
NUP88-203ENST00000572019 KIF4BQ2VIQ3 1234 aa24.98■■□□□ 1.59
NUP88-203ENST00000572019 PHAXQ9H814 394 aaKnown RBP24.98■■□□□ 1.59
NUP88-203ENST00000572019 ADAMTS8Q9UP79 889 aa24.98■■□□□ 1.59
NUP88-203ENST00000572019 TNRC18O15417 2968 aaPredicted RBP24.98■■□□□ 1.59
NUP88-203ENST00000572019 ZNF646O15015 1829 aaPredicted RBP24.98■■□□□ 1.59
NUP88-203ENST00000572019 MYBBP1AQ9BQG0 1328 aaKnown RBP24.97■■□□□ 1.59
NUP88-203ENST00000572019 RPS12P25398 132 aaKnown RBP24.97■■□□□ 1.59
NUP88-203ENST00000572019 KIF23Q02241 960 aaPredicted RBP24.97■■□□□ 1.59
NUP88-203ENST00000572019 TRIM28Q13263 835 aaKnown RBP24.97■■□□□ 1.59
NUP88-203ENST00000572019 GGA3Q9NZ52 723 aa24.97■■□□□ 1.59
NUP88-203ENST00000572019 VIL1P09327 827 aaKnown RBP24.96■■□□□ 1.59
NUP88-203ENST00000572019 DCPSQ96C86 337 aaKnown RBP24.96■■□□□ 1.59
NUP88-203ENST00000572019 CCDC85AQ96PX6 553 aaPredicted RBP24.96■■□□□ 1.59
NUP88-203ENST00000572019 HYPKQ9NX55 129 aa24.96■■□□□ 1.59
NUP88-203ENST00000572019 WTIPA6NIX2 430 aaPredicted RBP24.95■■□□□ 1.58
NUP88-203ENST00000572019 UFL1O94874 794 aa24.95■■□□□ 1.58
NUP88-203ENST00000572019 EYA3Q99504 573 aa24.95■■□□□ 1.58
NUP88-203ENST00000572019 SCAF8Q9UPN6 1271 aaKnown RBP24.95■■□□□ 1.58
NUP88-203ENST00000572019 DDX10Q13206 875 aaKnown RBP24.94■■□□□ 1.58
NUP88-203ENST00000572019 ZBTB38Q8NAP3 1195 aaPredicted RBP24.94■■□□□ 1.58
NUP88-203ENST00000572019 PODXL2Q9NZ53 605 aa24.94■■□□□ 1.58
NUP88-203ENST00000572019 ELL2O00472 640 aaPredicted RBP24.93■■□□□ 1.58
NUP88-203ENST00000572019 ZNF853P0CG23 659 aa24.93■■□□□ 1.58
NUP88-203ENST00000572019 ZNF157P51786 506 aaPredicted RBP24.93■■□□□ 1.58
NUP88-203ENST00000572019 RIC3Q7Z5B4 369 aa24.93■■□□□ 1.58
NUP88-203ENST00000572019 C2orf69Q8N8R5 385 aa24.93■■□□□ 1.58
NUP88-203ENST00000572019 CDCA5Q96FF9 252 aa24.93■■□□□ 1.58
NUP88-203ENST00000572019 MYD88Q99836 296 aa24.93■■□□□ 1.58
NUP88-203ENST00000572019 RNF186Q9NXI6 227 aa24.93■■□□□ 1.58
NUP88-203ENST00000572019 ZC3H12CQ9C0D7 883 aaKnown RBP24.92■■□□□ 1.58
NUP88-203ENST00000572019 PDE4DIPQ5VU43 2346 aa24.92■■□□□ 1.58
NUP88-203ENST00000572019 TRPA1O75762 1119 aa24.91■■□□□ 1.58
NUP88-203ENST00000572019 SLC10A3P09131 477 aa24.91■■□□□ 1.58
NUP88-203ENST00000572019 WDR43Q15061 677 aaKnown RBP eCLIP24.91■■□□□ 1.58
NUP88-203ENST00000572019 ANKIB1Q9P2G1 1089 aa24.91■■□□□ 1.58
NUP88-203ENST00000572019 MYH3P11055 1940 aa24.9■■□□□ 1.58
NUP88-203ENST00000572019 ZNF280AP59817 542 aaPredicted RBP24.9■■□□□ 1.58
NUP88-203ENST00000572019 ANGEL2Q5VTE6 544 aaKnown RBP24.9■■□□□ 1.58
NUP88-203ENST00000572019 CSRNP1Q96S65 589 aa24.9■■□□□ 1.58
NUP88-203ENST00000572019 GGA1Q9UJY5 639 aa24.9■■□□□ 1.58
NUP88-203ENST00000572019 ZNF609O15014 1411 aa24.89■■□□□ 1.58
NUP88-203ENST00000572019 SCARF1Q14162 830 aa24.89■■□□□ 1.58
NUP88-203ENST00000572019 RSBN1LQ6PCB5 846 aaPredicted RBP24.89■■□□□ 1.58
NUP88-203ENST00000572019 MOB2Q70IA6 237 aa24.89■■□□□ 1.58
NUP88-203ENST00000572019 SULF1Q8IWU6 871 aa24.89■■□□□ 1.58
NUP88-203ENST00000572019 CCDC102AQ96A19 550 aa24.89■■□□□ 1.58
NUP88-203ENST00000572019 GMLQ99445 158 aa24.89■■□□□ 1.58
NUP88-203ENST00000572019 PAPPA2Q9BXP8 1791 aa24.88■■□□□ 1.57
NUP88-203ENST00000572019 GOLGA2Q08379 1002 aa24.88■■□□□ 1.57
NUP88-203ENST00000572019 RASAL3Q86YV0 1011 aa24.88■■□□□ 1.57
NUP88-203ENST00000572019 C8orf58Q8NAV2 365 aa24.88■■□□□ 1.57
NUP88-203ENST00000572019 SAGE1Q9NXZ1 904 aa24.88■■□□□ 1.57
NUP88-203ENST00000572019 PCCAP05165 728 aaPredicted RBP24.87■■□□□ 1.57
NUP88-203ENST00000572019 MXD3Q9BW11 206 aa24.87■■□□□ 1.57
NUP88-203ENST00000572019 SOX10P56693 466 aa24.86■■□□□ 1.57
NUP88-203ENST00000572019 G3V3G9 751 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 APAF1O14727 1248 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 PDE8AO60658 829 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 CCDC152Q4G0S7 254 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 DCAF8Q5TAQ9 597 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 PRAMEF18Q5VWM3 479 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 CCDC191Q8NCU4 936 aa24.85■■□□□ 1.57
NUP88-203ENST00000572019 AGBL3Q8NEM8 1001 aa24.84■■□□□ 1.57
NUP88-203ENST00000572019 MYOZ2Q9NPC6 264 aa24.84■■□□□ 1.57
NUP88-203ENST00000572019 CWC25Q9NXE8 425 aaPredicted RBP24.84■■□□□ 1.57
NUP88-203ENST00000572019 TSPYL6Q8N831 410 aa24.83■■□□□ 1.57
NUP88-203ENST00000572019 METTL22Q9BUU2 404 aaPredicted RBP24.83■■□□□ 1.57
NUP88-203ENST00000572019 IFT57Q9NWB7 429 aa24.83■■□□□ 1.57
NUP88-203ENST00000572019 XDHP47989 1333 aa24.83■■□□□ 1.56
NUP88-203ENST00000572019 USP17L8P0C7I0 530 aa24.82■■□□□ 1.56
NUP88-203ENST00000572019 IGKV5-2P06315 115 aa24.81■■□□□ 1.56
NUP88-203ENST00000572019 NBPF9Q3BBW0 867 aa24.81■■□□□ 1.56
NUP88-203ENST00000572019 ANKRD18AQ8IVF6 992 aa24.81■■□□□ 1.56
NUP88-203ENST00000572019 MAP3K2Q9Y2U5 619 aa24.8■■□□□ 1.56
NUP88-203ENST00000572019 USP17L3A6NCW0 530 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 USP17L4A6NCW7 530 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 UBE2Q2LH0YL09 131 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 CTSWP56202 376 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 USP17L1Q7RTZ2 530 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 TXNRD3Q86VQ6 643 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 GREM2Q9H772 168 aa24.79■■□□□ 1.56
NUP88-203ENST00000572019 ATP2B4P23634 1241 aa24.78■■□□□ 1.56
NUP88-203ENST00000572019 TTLL11Q8NHH1 800 aa24.78■■□□□ 1.56
NUP88-203ENST00000572019 MINPP1Q9UNW1 487 aa24.78■■□□□ 1.56
NUP88-203ENST00000572019 GNAI1P63096 354 aa24.77■■□□□ 1.56
NUP88-203ENST00000572019 DACT2Q5SW24 774 aa24.77■■□□□ 1.56
NUP88-203ENST00000572019 CTU1Q7Z7A3 348 aaKnown RBP24.77■■□□□ 1.56
NUP88-203ENST00000572019 PITPNM2Q9BZ72 1349 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms