RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	TBC1D16	Q8TBP0	767 aa		31.84	■■■□□ 2.69
ABR-215	ENST00000571945	FRAT1	Q92837	279 aa	Predicted RBP	31.84	■■■□□ 2.69
ABR-215	ENST00000571945	POLL	Q9UGP5	575 aa		31.84	■■■□□ 2.69
ABR-215	ENST00000571945	ZKSCAN2	Q63HK3	967 aa		31.83	■■■□□ 2.69
ABR-215	ENST00000571945	MPHOSPH8	Q99549	860 aa		31.83	■■■□□ 2.69
ABR-215	ENST00000571945	GGA1	Q9UJY5	639 aa		31.83	■■■□□ 2.69
ABR-215	ENST00000571945	EIF6	P56537	245 aa	Known RBP	31.82	■■■□□ 2.68
ABR-215	ENST00000571945	CCDC57	Q2TAC2	916 aa		31.82	■■■□□ 2.68
ABR-215	ENST00000571945	BICC1	Q9H694	974 aa	Known RBP	31.82	■■■□□ 2.68
ABR-215	ENST00000571945	MINPP1	Q9UNW1	487 aa		31.82	■■■□□ 2.68
ABR-215	ENST00000571945	C6orf229	H3BNL8	230 aa		31.81	■■■□□ 2.68
ABR-215	ENST00000571945	UFL1	O94874	794 aa		31.81	■■■□□ 2.68
ABR-215	ENST00000571945	L3MBTL3	Q96JM7	780 aa	Predicted RBP	31.81	■■■□□ 2.68
ABR-215	ENST00000571945	ATP2B4	P23634	1241 aa		31.8	■■■□□ 2.68
ABR-215	ENST00000571945	WASHC4	Q2M389	1173 aa		31.8	■■■□□ 2.68
ABR-215	ENST00000571945	ANKRD44	Q8N8A2	993 aa		31.8	■■■□□ 2.68
ABR-215	ENST00000571945	HDAC5	Q9UQL6	1122 aa		31.8	■■■□□ 2.68
ABR-215	ENST00000571945	DDN	O94850	711 aa	Predicted RBP	31.79	■■■□□ 2.68
ABR-215	ENST00000571945	UBTFL1	P0CB47	393 aa	Predicted RBP	31.79	■■■□□ 2.68
ABR-215	ENST00000571945	GPC2	Q8N158	579 aa		31.79	■■■□□ 2.68
ABR-215	ENST00000571945	ZNRF3	Q9ULT6	936 aa		31.79	■■■□□ 2.68
ABR-215	ENST00000571945	VEGFA	P15692	232 aa	Predicted RBP	31.78	■■■□□ 2.68
ABR-215	ENST00000571945	ANKRD2	Q9GZV1	360 aa		31.78	■■■□□ 2.68
ABR-215	ENST00000571945	RRAGC	Q9HB90	399 aa		31.78	■■■□□ 2.68
ABR-215	ENST00000571945	PSME4	Q14997	1843 aa		31.77	■■■□□ 2.68
ABR-215	ENST00000571945	TAF7L	Q5H9L4	462 aa		31.77	■■■□□ 2.68
ABR-215	ENST00000571945	MED23	Q9ULK4	1368 aa		31.76	■■■□□ 2.67
ABR-215	ENST00000571945	ZC3H12C	Q9C0D7	883 aa	Known RBP	31.75	■■■□□ 2.67
ABR-215	ENST00000571945	IQCA1L	A6NCM1	817 aa		31.74	■■■□□ 2.67
ABR-215	ENST00000571945	TNN	Q9UQP3	1299 aa		31.74	■■■□□ 2.67
ABR-215	ENST00000571945	LEMD3	Q9Y2U8	911 aa		31.74	■■■□□ 2.67
ABR-215	ENST00000571945	POTEC	B2RU33	542 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	TOMM70	O94826	608 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	GNAI3	P08754	354 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	C1QTNF8	P60827	252 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	CHRND	Q07001	517 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.73	■■■□□ 2.67
ABR-215	ENST00000571945	CLUAP1	Q96AJ1	413 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	MEIS3	Q99687	375 aa		31.73	■■■□□ 2.67
ABR-215	ENST00000571945	SCN9A	Q15858	1988 aa		31.72	■■■□□ 2.67
ABR-215	ENST00000571945	LDHAL6A	Q6ZMR3	332 aa		31.72	■■■□□ 2.67
ABR-215	ENST00000571945	GPR101	Q96P66	508 aa	Predicted RBP	31.72	■■■□□ 2.67
ABR-215	ENST00000571945	RIMBP2	O15034	1052 aa		31.71	■■■□□ 2.67
ABR-215	ENST00000571945	FTSJ3	Q8IY81	847 aa	Known RBP	31.71	■■■□□ 2.67
ABR-215	ENST00000571945	ZNF594	Q96JF6	807 aa	Predicted RBP	31.71	■■■□□ 2.67
ABR-215	ENST00000571945	CXCL9	Q07325	125 aa		31.7	■■■□□ 2.67
ABR-215	ENST00000571945	RBM46	Q8TBY0	533 aa	Known RBP	31.7	■■■□□ 2.67
ABR-215	ENST00000571945	DBNDD1	Q9H9R9	158 aa		31.7	■■■□□ 2.67
ABR-215	ENST00000571945	CNNM1	Q9NRU3	951 aa		31.7	■■■□□ 2.67
ABR-215	ENST00000571945	YDJC	A8MPS7	323 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	ECE2	O60344	883 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	TNIP1	Q15025	636 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	CIAPIN1	Q6FI81	312 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	DZIP1L	Q8IYY4	767 aa	Known RBP	31.69	■■■□□ 2.66
ABR-215	ENST00000571945	TMEM57	Q8N5G2	664 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	RCAN3	Q9UKA8	241 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	LRRFIP2	Q9Y608	721 aa	Known RBP	31.69	■■■□□ 2.66
ABR-215	ENST00000571945	GJA3	Q9Y6H8	435 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	ZNF804B	A4D1E1	1349 aa		31.69	■■■□□ 2.66
ABR-215	ENST00000571945	HACL1	Q9UJ83	578 aa		31.67	■■■□□ 2.66
ABR-215	ENST00000571945	ADAMTSL1	Q8N6G6	1762 aa		31.66	■■■□□ 2.66
ABR-215	ENST00000571945	KCNJ4	P48050	445 aa		31.66	■■■□□ 2.66
ABR-215	ENST00000571945		G3V3G9	751 aa		31.65	■■■□□ 2.66
ABR-215	ENST00000571945	DOK7	Q18PE1	504 aa		31.65	■■■□□ 2.66
ABR-215	ENST00000571945	DCAF8	Q5TAQ9	597 aa		31.65	■■■□□ 2.66
ABR-215	ENST00000571945	MROH5	Q6ZUA9	1318 aa		31.65	■■■□□ 2.66
ABR-215	ENST00000571945	ZNF646	O15015	1829 aa	Predicted RBP	31.65	■■■□□ 2.66
ABR-215	ENST00000571945	RAD17	O75943	681 aa		31.64	■■■□□ 2.66
ABR-215	ENST00000571945	MS4A1	P11836	297 aa		31.64	■■■□□ 2.66
ABR-215	ENST00000571945	LMOD1	P29536	600 aa	Predicted RBP	31.64	■■■□□ 2.66
ABR-215	ENST00000571945	SCNN1D	P51172	638 aa		31.64	■■■□□ 2.66
ABR-215	ENST00000571945	TAF1D	Q9H5J8	278 aa	Predicted RBP	31.64	■■■□□ 2.66
ABR-215	ENST00000571945	ZNF609	O15014	1411 aa		31.64	■■■□□ 2.66
ABR-215	ENST00000571945	RFX5	P48382	616 aa	Predicted RBP	31.63	■■■□□ 2.65
ABR-215	ENST00000571945	C15orf52	Q6ZUT6	534 aa	Known RBP	31.63	■■■□□ 2.65
ABR-215	ENST00000571945	WTIP	A6NIX2	430 aa	Predicted RBP	31.62	■■■□□ 2.65
ABR-215	ENST00000571945	RLBP1	P12271	317 aa		31.62	■■■□□ 2.65
ABR-215	ENST00000571945	PODN	Q7Z5L7	613 aa		31.62	■■■□□ 2.65
ABR-215	ENST00000571945	PUS3	Q9BZE2	481 aa	Known RBP	31.62	■■■□□ 2.65
ABR-215	ENST00000571945	RIPOR2	Q9Y4F9	1068 aa		31.62	■■■□□ 2.65
ABR-215	ENST00000571945	IRS2	Q9Y4H2	1338 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	TAF5L	O75529	589 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	GNAI2	P04899	355 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	EPHX2	P34913	555 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	FSTL1	Q12841	308 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	MTX1	Q13505	466 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	SMC1B	Q8NDV3	1235 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	HELB	Q8NG08	1087 aa	Predicted RBP	31.61	■■■□□ 2.65
ABR-215	ENST00000571945	COA1	Q9GZY4	146 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	FBXO3	Q9UK99	471 aa		31.61	■■■□□ 2.65
ABR-215	ENST00000571945	ITPRIP	Q8IWB1	547 aa		31.6	■■■□□ 2.65
ABR-215	ENST00000571945	GPRC5D	Q9NZD1	345 aa		31.6	■■■□□ 2.65
ABR-215	ENST00000571945	PSMD14	O00487	310 aa		31.59	■■■□□ 2.65
ABR-215	ENST00000571945	GMPS	P49915	693 aa	Predicted RBP	31.59	■■■□□ 2.65
ABR-215	ENST00000571945	PTPN12	Q05209	780 aa	Known RBP	31.59	■■■□□ 2.65
ABR-215	ENST00000571945	PNMA8A	Q86V59	439 aa	Predicted RBP	31.59	■■■□□ 2.65
ABR-215	ENST00000571945	RPS12	P25398	132 aa	Known RBP	31.58	■■■□□ 2.65
ABR-215	ENST00000571945	KLRK1	P26718	216 aa		31.58	■■■□□ 2.65
ABR-215	ENST00000571945	TXNRD3	Q86VQ6	643 aa		31.58	■■■□□ 2.65
ABR-215	ENST00000571945	KLHDC4	Q8TBB5	520 aa		31.58	■■■□□ 2.65

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