RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 LMBR1LQ6UX01 489 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 CDC5LQ99459 802 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 SCN4AP35499 1836 aa12.97□□□□□ -0.33
GTF3C1-213ENST00000571886 UTYO14607 1347 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 RAD17O75943 681 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 UFL1O94874 794 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 HSPA6P17066 643 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 SCNN1DP51172 638 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 GPC2Q8N158 579 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
GTF3C1-213ENST00000571886 SCN9AQ15858 1988 aa12.96□□□□□ -0.34
GTF3C1-213ENST00000571886 SNAP23O00161 211 aa12.95□□□□□ -0.34
GTF3C1-213ENST00000571886 EPS15P42566 896 aa12.95□□□□□ -0.34
GTF3C1-213ENST00000571886 GGA1Q9UJY5 639 aa12.95□□□□□ -0.34
GTF3C1-213ENST00000571886 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
GTF3C1-213ENST00000571886 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 EPHX2P34913 555 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 HTRA3P83110 453 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 TXNRD3Q86VQ6 643 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
GTF3C1-213ENST00000571886 XDHP47989 1333 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 ECE2O60344 883 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 KLRK1P26718 216 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 CCT4P50991 539 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 FSTL1Q12841 308 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 IFIT5Q13325 482 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 ANKRD44Q8N8A2 993 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 SMC1BQ8NDV3 1235 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 EYA3Q99504 573 aa12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 ZC3H12CQ9C0D7 883 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 BICC1Q9H694 974 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-213ENST00000571886 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 A0A1B0GUL6 1792 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 IQCA1LA6NCM1 817 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 PSMD14O00487 310 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 TAF5LO75529 589 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 GMPSP49915 693 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 CHRNDQ07001 517 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
GTF3C1-213ENST00000571886 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-213ENST00000571886 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
GTF3C1-213ENST00000571886 API5Q9BZZ5 524 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-213ENST00000571886 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
GTF3C1-213ENST00000571886 CEP350Q5VT06 3117 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 TNIP1Q15025 636 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 ARHGAP45Q92619 1136 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
GTF3C1-213ENST00000571886 ZNF804BA4D1E1 1349 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 IRS2Q9Y4H2 1338 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 PLIN1O60240 522 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 TRIM27P14373 513 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 HIRAP54198 1017 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 MEIS3Q99687 375 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 LEMD3Q9Y2U8 911 aa12.89□□□□□ -0.35
GTF3C1-213ENST00000571886 PSME4Q14997 1843 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 G3V3G9 751 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 EGFRP00533 1210 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 RFX5P48382 616 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 APLP1P51693 650 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 DNAJC5GQ8N7S2 189 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 MXD3Q9BW11 206 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 MED23Q9ULK4 1368 aa12.88□□□□□ -0.35
GTF3C1-213ENST00000571886 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms