RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CDC37L1Q7L3B6 337 aa22.69■■□□□ 1.22
CIITA-206ENST00000571190 CCDC30Q5VVM6 783 aa22.68■■□□□ 1.22
CIITA-206ENST00000571190 USP48Q86UV5 1035 aa22.68■■□□□ 1.22
CIITA-206ENST00000571190 EYA3Q99504 573 aa22.68■■□□□ 1.22
CIITA-206ENST00000571190 CWC25Q9NXE8 425 aaPredicted RBP22.68■■□□□ 1.22
CIITA-206ENST00000571190 TAF1P21675 1872 aa22.68■■□□□ 1.22
CIITA-206ENST00000571190 PDE8AO60658 829 aa22.67■■□□□ 1.22
CIITA-206ENST00000571190 TBC1D10BQ4KMP7 808 aaPredicted RBP22.67■■□□□ 1.22
CIITA-206ENST00000571190 HHIPL1Q96JK4 782 aa22.67■■□□□ 1.22
CIITA-206ENST00000571190 IGKV5-2P06315 115 aa22.66■■□□□ 1.22
CIITA-206ENST00000571190 RPS12P25398 132 aaKnown RBP22.66■■□□□ 1.22
CIITA-206ENST00000571190 MAP2K2P36507 400 aa22.66■■□□□ 1.22
CIITA-206ENST00000571190 CCDC152Q4G0S7 254 aa22.66■■□□□ 1.22
CIITA-206ENST00000571190 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
CIITA-206ENST00000571190 CCDC85AQ96PX6 553 aaPredicted RBP22.66■■□□□ 1.22
CIITA-206ENST00000571190 ZNF408Q9H9D4 720 aa22.66■■□□□ 1.22
CIITA-206ENST00000571190 MAP3K2Q9Y2U5 619 aa22.66■■□□□ 1.22
CIITA-206ENST00000571190 THSD7BQ9C0I4 1608 aa22.65■■□□□ 1.22
CIITA-206ENST00000571190 UFL1O94874 794 aa22.65■■□□□ 1.22
CIITA-206ENST00000571190 VIL1P09327 827 aaKnown RBP22.65■■□□□ 1.22
CIITA-206ENST00000571190 HSP90B1P14625 803 aaKnown RBP22.65■■□□□ 1.22
CIITA-206ENST00000571190 ZC3H12CQ9C0D7 883 aaKnown RBP22.65■■□□□ 1.22
CIITA-206ENST00000571190 DDX58O95786 925 aaKnown RBP22.64■■□□□ 1.21
CIITA-206ENST00000571190 GGA1Q9UJY5 639 aa22.64■■□□□ 1.21
CIITA-206ENST00000571190 PI4KAP2A4QPH2 592 aa22.63■■□□□ 1.21
CIITA-206ENST00000571190 RBM26Q5T8P6 1007 aaKnown RBP22.63■■□□□ 1.21
CIITA-206ENST00000571190 KSR2Q6VAB6 950 aa22.63■■□□□ 1.21
CIITA-206ENST00000571190 PI4KAP1Q8N8J0 262 aa22.63■■□□□ 1.21
CIITA-206ENST00000571190 ANKIB1Q9P2G1 1089 aa22.63■■□□□ 1.21
CIITA-206ENST00000571190 WTIPA6NIX2 430 aaPredicted RBP22.62■■□□□ 1.21
CIITA-206ENST00000571190 CCDC27Q2M243 656 aa22.62■■□□□ 1.21
CIITA-206ENST00000571190 KRT26Q7Z3Y9 468 aa22.62■■□□□ 1.21
CIITA-206ENST00000571190 WWC1Q8IX03 1113 aa22.62■■□□□ 1.21
CIITA-206ENST00000571190 G2E3Q7L622 706 aa22.61■■□□□ 1.21
CIITA-206ENST00000571190 ZIC5Q96T25 663 aa22.61■■□□□ 1.21
CIITA-206ENST00000571190 CHMP4AQ9BY43 222 aa22.61■■□□□ 1.21
CIITA-206ENST00000571190 TSKSQ9UJT2 592 aa22.61■■□□□ 1.21
CIITA-206ENST00000571190 ASTN2O75129 1339 aaPredicted RBP22.6■■□□□ 1.21
CIITA-206ENST00000571190 ADM5C9JUS6 153 aa22.6■■□□□ 1.21
CIITA-206ENST00000571190 CTSWP56202 376 aa22.6■■□□□ 1.21
CIITA-206ENST00000571190 ANKRD18AQ8IVF6 992 aa22.6■■□□□ 1.21
CIITA-206ENST00000571190 TTLL11Q8NHH1 800 aa22.6■■□□□ 1.21
CIITA-206ENST00000571190 BEGAINQ9BUH8 593 aa22.6■■□□□ 1.21
CIITA-206ENST00000571190 CWF19L2Q2TBE0 894 aaKnown RBP22.59■■□□□ 1.21
CIITA-206ENST00000571190 KIF4BQ2VIQ3 1234 aa22.59■■□□□ 1.21
CIITA-206ENST00000571190 ABHD8Q96I13 439 aa22.59■■□□□ 1.21
CIITA-206ENST00000571190 GMLQ99445 158 aa22.59■■□□□ 1.21
CIITA-206ENST00000571190 XDHP47989 1333 aa22.58■■□□□ 1.21
CIITA-206ENST00000571190 BRPF1P55201 1214 aaPredicted RBP22.58■■□□□ 1.21
CIITA-206ENST00000571190 HUNKP57058 714 aa22.58■■□□□ 1.21
CIITA-206ENST00000571190 ZNF280AP59817 542 aaPredicted RBP22.58■■□□□ 1.21
CIITA-206ENST00000571190 TWISTNBQ3B726 338 aaPredicted RBP22.58■■□□□ 1.21
CIITA-206ENST00000571190 GREM2Q9H772 168 aa22.58■■□□□ 1.21
CIITA-206ENST00000571190 NEURL1BA8MQ27 555 aa22.57■■□□□ 1.2
CIITA-206ENST00000571190 ATP2B4P23634 1241 aa22.57■■□□□ 1.2
CIITA-206ENST00000571190 RSBN1LQ6PCB5 846 aaPredicted RBP22.57■■□□□ 1.2
CIITA-206ENST00000571190 DCPSQ96C86 337 aaKnown RBP22.57■■□□□ 1.2
CIITA-206ENST00000571190 STK31Q9BXU1 1019 aa22.57■■□□□ 1.2
CIITA-206ENST00000571190 G3V3G9 751 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 H7C1W4 665 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 SLC4A2P04920 1241 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 DCAF8Q5TAQ9 597 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 AGBL3Q8NEM8 1001 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 GBA2Q9HCG7 927 aaPredicted RBP22.56■■□□□ 1.2
CIITA-206ENST00000571190 BSDC1Q9NW68 430 aaPredicted RBP22.56■■□□□ 1.2
CIITA-206ENST00000571190 GGA3Q9NZ52 723 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 MINPP1Q9UNW1 487 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 ZNF609O15014 1411 aa22.56■■□□□ 1.2
CIITA-206ENST00000571190 FAM155AB1AL88 458 aaPredicted RBP22.55■■□□□ 1.2
CIITA-206ENST00000571190 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
CIITA-206ENST00000571190 TRPM7Q96QT4 1865 aa22.55■■□□□ 1.2
CIITA-206ENST00000571190 IL16Q14005 1332 aa22.55■■□□□ 1.2
CIITA-206ENST00000571190 NEXNQ0ZGT2 675 aa22.54■■□□□ 1.2
CIITA-206ENST00000571190 NOGQ13253 232 aa22.54■■□□□ 1.2
CIITA-206ENST00000571190 PODNQ7Z5L7 613 aa22.54■■□□□ 1.2
CIITA-206ENST00000571190 CA12O43570 354 aa22.53■■□□□ 1.2
CIITA-206ENST00000571190 CASP7P55210 303 aa22.53■■□□□ 1.2
CIITA-206ENST00000571190 SCARF1Q14162 830 aa22.53■■□□□ 1.2
CIITA-206ENST00000571190 NCBP3Q53F19 620 aaKnown RBP22.53■■□□□ 1.2
CIITA-206ENST00000571190 RGMBQ6NW40 437 aa22.53■■□□□ 1.2
CIITA-206ENST00000571190 C2orf69Q8N8R5 385 aa22.53■■□□□ 1.2
CIITA-206ENST00000571190 UBE3BQ7Z3V4 1068 aa22.52■■□□□ 1.2
CIITA-206ENST00000571190 USP17L3A6NCW0 530 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 USP17L4A6NCW7 530 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 CCT4P50991 539 aaKnown RBP22.51■■□□□ 1.19
CIITA-206ENST00000571190 FLIIQ13045 1269 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 GCKRQ14397 625 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 ANGEL2Q5VTE6 544 aaKnown RBP22.51■■□□□ 1.19
CIITA-206ENST00000571190 USP17L1Q7RTZ2 530 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 TXNRD3Q86VQ6 643 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 SULF1Q8IWU6 871 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 CDCA5Q96FF9 252 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 PLA2G12BQ9BX93 195 aa22.51■■□□□ 1.19
CIITA-206ENST00000571190 MED23Q9ULK4 1368 aa22.5■■□□□ 1.19
CIITA-206ENST00000571190 USP17L8P0C7I0 530 aa22.5■■□□□ 1.19
CIITA-206ENST00000571190 MXD3Q9BW11 206 aa22.5■■□□□ 1.19
CIITA-206ENST00000571190 MYOZ2Q9NPC6 264 aa22.5■■□□□ 1.19
CIITA-206ENST00000571190 SCN9AQ15858 1988 aa22.5■■□□□ 1.19
CIITA-206ENST00000571190 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
CIITA-206ENST00000571190 DACT2Q5SW24 774 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms