RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 FAM155AB1AL88 458 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-205ENST00000571028 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-205ENST00000571028 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
CCDC40-205ENST00000571028 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
CCDC40-205ENST00000571028 PDE4DIPQ5VU43 2346 aa17.04■□□□□ 0.32
CCDC40-205ENST00000571028 ZBED9Q6R2W3 1325 aa17.03■□□□□ 0.32
CCDC40-205ENST00000571028 PDIA6Q15084 440 aa17.03■□□□□ 0.32
CCDC40-205ENST00000571028 SLC10A5Q5PT55 438 aa17.03■□□□□ 0.32
CCDC40-205ENST00000571028 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
CCDC40-205ENST00000571028 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
CCDC40-205ENST00000571028 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
CCDC40-205ENST00000571028 DPF2Q92785 391 aa17.03■□□□□ 0.32
CCDC40-205ENST00000571028 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 ADM5C9JUS6 153 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 VAMP4O75379 141 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 GRAPQ13588 217 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 SULF1Q8IWU6 871 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.32
CCDC40-205ENST00000571028 STK31Q9BXU1 1019 aa17.02■□□□□ 0.32
CCDC40-205ENST00000571028 DBF4Q9UBU7 674 aaPredicted RBP17.02■□□□□ 0.32
CCDC40-205ENST00000571028 NUP98P52948 1817 aa17.02■□□□□ 0.31
CCDC40-205ENST00000571028 PSMD14O00487 310 aa17.01■□□□□ 0.31
CCDC40-205ENST00000571028 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-205ENST00000571028 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
CCDC40-205ENST00000571028 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
CCDC40-205ENST00000571028 XAGE3Q8WTP9 111 aa17.01■□□□□ 0.31
CCDC40-205ENST00000571028 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
CCDC40-205ENST00000571028 SLC10A3P09131 477 aa17■□□□□ 0.31
CCDC40-205ENST00000571028 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
CCDC40-205ENST00000571028 HSP90AB3PQ58FF7 597 aa17■□□□□ 0.31
CCDC40-205ENST00000571028 COPS6Q7L5N1 327 aa17■□□□□ 0.31
CCDC40-205ENST00000571028 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
CCDC40-205ENST00000571028 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
CCDC40-205ENST00000571028 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
CCDC40-205ENST00000571028 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
CCDC40-205ENST00000571028 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
CCDC40-205ENST00000571028 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
CCDC40-205ENST00000571028 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
CCDC40-205ENST00000571028 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
CCDC40-205ENST00000571028 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
CCDC40-205ENST00000571028 C6orf229H3BNL8 230 aa16.98■□□□□ 0.31
CCDC40-205ENST00000571028 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
CCDC40-205ENST00000571028 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
CCDC40-205ENST00000571028 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
CCDC40-205ENST00000571028 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
CCDC40-205ENST00000571028 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
CCDC40-205ENST00000571028 NSFL1CQ9UNZ2 370 aaKnown RBP16.98■□□□□ 0.31
CCDC40-205ENST00000571028 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 G3V3G9 751 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 ECE2O60344 883 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 EGFRP00533 1210 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 NLRP10Q86W26 655 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 EYA3Q99504 573 aa16.96■□□□□ 0.31
CCDC40-205ENST00000571028 G2E3Q7L622 706 aa16.95■□□□□ 0.3
CCDC40-205ENST00000571028 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
CCDC40-205ENST00000571028 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
CCDC40-205ENST00000571028 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
CCDC40-205ENST00000571028 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
CCDC40-205ENST00000571028 FKBP1BP68106 108 aa16.93■□□□□ 0.3
CCDC40-205ENST00000571028 ANKRD13DQ6ZTN6 518 aa16.93■□□□□ 0.3
CCDC40-205ENST00000571028 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
CCDC40-205ENST00000571028 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
CCDC40-205ENST00000571028 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
CCDC40-205ENST00000571028 PLBD2Q8NHP8 589 aa16.92■□□□□ 0.3
CCDC40-205ENST00000571028 ZNF296Q8WUU4 475 aaPredicted RBP16.92■□□□□ 0.3
CCDC40-205ENST00000571028 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
CCDC40-205ENST00000571028 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
CCDC40-205ENST00000571028 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
CCDC40-205ENST00000571028 DDX58O95786 925 aaKnown RBP16.91■□□□□ 0.3
CCDC40-205ENST00000571028 FLIIQ13045 1269 aa16.91■□□□□ 0.3
CCDC40-205ENST00000571028 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-205ENST00000571028 TCIRG1Q13488 830 aa16.91■□□□□ 0.3
CCDC40-205ENST00000571028 ZC3H12CQ9C0D7 883 aaKnown RBP16.91■□□□□ 0.3
CCDC40-205ENST00000571028 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
CCDC40-205ENST00000571028 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
CCDC40-205ENST00000571028 GPSM2P81274 684 aa16.9■□□□□ 0.3
CCDC40-205ENST00000571028 TTLL12Q14166 644 aaPredicted RBP16.9■□□□□ 0.3
CCDC40-205ENST00000571028 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
CCDC40-205ENST00000571028 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
CCDC40-205ENST00000571028 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
CCDC40-205ENST00000571028 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
CCDC40-205ENST00000571028 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
CCDC40-205ENST00000571028 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.29
CCDC40-205ENST00000571028 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
CCDC40-205ENST00000571028 SCARF1Q14162 830 aa16.89■□□□□ 0.29
CCDC40-205ENST00000571028 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
CCDC40-205ENST00000571028 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.29
CCDC40-205ENST00000571028 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
CCDC40-205ENST00000571028 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
CCDC40-205ENST00000571028 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
CCDC40-205ENST00000571028 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
CCDC40-205ENST00000571028 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
CCDC40-205ENST00000571028 TBC1D16Q8TBP0 767 aa16.88■□□□□ 0.29
CCDC40-205ENST00000571028 MYD88Q99836 296 aa16.88■□□□□ 0.29
CCDC40-205ENST00000571028 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
CCDC40-205ENST00000571028 LAMB2P55268 1798 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms